RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 GCGP01275 180 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 PRSS1P07477 247 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 POU2F2P09086 479 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 LPAL2Q16609 132 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 C9orf50Q5SZB4 431 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 ZCCHC14Q8WYQ9 949 aaKnown RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 BCL2L2Q92843 193 aaPredicted RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 UCN2Q96RP3 112 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 FAM117AQ9C073 453 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 LHFPL6Q9Y693 200 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 NCBP2LA6PVI3 153 aaKnown RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 B4DEV8 164 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CDS2O95674 445 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 SOD3P08294 240 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 GALNSP34059 522 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CAMPP49913 170 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 SPATA45Q537H7 98 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 OR2M3Q8NG83 312 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CITED1Q99966 193 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CHST5Q9GZS9 411 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 MYOZ1Q9NP98 299 aaPredicted RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 SLC7A10Q9NS82 523 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 PRSS50Q9UI38 385 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 ATG2BQ96BY7 2078 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 DHRS7CA6NNS2 312 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 TMEM14DPA8MWL7 114 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 RAMP1O60894 148 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CSN3P07498 182 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 NPY1RP25929 384 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 RAC1P63000 192 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 IL24Q13007 206 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 PRDX4Q13162 271 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 SHHQ15465 462 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 TMEM164Q5U3C3 297 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 LYSMD4Q5XG99 296 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 C12orf54Q6X4T0 127 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 C1QL2Q7Z5L3 287 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 SRD5A3Q9H8P0 318 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 UQCR10Q9UDW1 63 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 MTCL1Q9Y4B5 1905 aaKnown RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 TSPAN2O60636 221 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CNIH1O95406 144 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 TRGC1P0CF51 173 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 IGFBP3P17936 291 aaPredicted RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 FCARP24071 287 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CTSSP25774 331 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 CLDN15P56746 228 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 EDDM3BP56851 147 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 RPS19BP1Q86WX3 136 aaKnown RBP6.2□□□□□ -1.42
USP3-210ENST00000559192 NDFIP1Q9BT67 221 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 DUSP23Q9BVJ7 150 aa6.2□□□□□ -1.42
USP3-210ENST00000559192 TRAV39A0A0B4J263 110 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 F8VVB4 439 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 F8VWA3 439 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 STAG3L3P0CL85 134 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 FKBP2P26885 142 aaKnown RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 CEACAM6P40199 344 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 GAMTQ14353 236 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CXorf66Q5JRM2 361 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 OR10G4Q8NGN3 311 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 OR10G9Q8NGN4 311 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 OR10G7Q8NGN6 311 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 RAB37Q96AX2 223 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 BOKQ9UMX3 212 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 OR5B21A6NL26 309 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 COLCA2A8K830 154 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CRYAAP02489 173 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 PSG2P11465 335 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 HOXB1P14653 301 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 LINC00696Q6ZRV3 163 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CNEP1R1Q8N9A8 125 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 OR10V1Q8NGI7 309 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 RAB40CQ96S21 281 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 GOLGB1Q14789 3259 aaKnown RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 IGHV1OR21-1A0A087WYE8 117 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 UBE2CO00762 179 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 TIMM8AO60220 97 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 NDUFS6O75380 124 aaKnown RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 DUSP3P51452 185 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 DSCR4P56555 118 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 EXT1Q16394 746 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CXorf67Q86X51 503 aaPredicted RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 OR4B1Q8NGF8 309 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 TMEM230Q96A57 120 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 OR2J1Q9GZK6 312 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 DNAJC4Q9NNZ3 241 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CYTL1Q9NRR1 136 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 A0A1W2PPE3 182 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 PRF1P14222 555 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 GNG4P50150 75 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 HYAL1Q12794 435 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 ACSM6Q6P461 480 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 CRIPAKQ8N1N5 446 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
USP3-210ENST00000559192 ZNF385AQ96PM9 386 aaKnown RBP6.19□□□□□ -1.42
USP3-210ENST00000559192 RTL8AQ9BWD3 113 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms