RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC168Q8NDH2 2452 aa14.9□□□□□ -0.02
CLPX-203ENST00000558958 PPIAL4CA0A0B4J2A2 164 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 FAM157AC9JC47 383 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 NPIPB11E5RHQ5 1161 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 SPINT2O43291 252 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 LYRM1O43325 122 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 CTXN2P0C2S0 81 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 PPIAL4GP0DN37 164 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 FAUP35544 74 aaKnown RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 MEF2DQ14814 521 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 RFESDQ8TAC1 157 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 GALMQ96C23 342 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 ZNF714Q96N38 554 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 C7orf50Q9BRJ6 194 aaKnown RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 CABLES2Q9BTV7 478 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 C11orf54Q9H0W9 315 aaPredicted RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 EHFQ9NZC4 300 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 MED13LQ71F56 2210 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 SDCBPO00560 298 aaPredicted RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 FOXH1O75593 365 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 DIRAS3O95661 229 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 ZNF728P0DKX0 622 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 OR5H8P0DN80 308 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 CCL3L1P16619 93 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 DLX6P56179 175 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 DEFA1P59665 94 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 DEFA3P59666 94 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 LCN2P80188 198 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 OR56B4Q8NH76 319 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 IL1F10Q8WWZ1 152 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 DACT3Q96B18 629 aaPredicted RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 REG4Q9BYZ8 158 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 GAL3ST2Q9H3Q3 398 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 RAB9BQ9NP90 201 aa14.89□□□□□ -0.03
CLPX-203ENST00000558958 POLR3KQ9Y2Y1 108 aaPredicted RBP14.89□□□□□ -0.03
CLPX-203ENST00000558958 FLNBO75369 2602 aaKnown RBP14.88□□□□□ -0.03
CLPX-203ENST00000558958 PRRC2AP48634 2157 aaKnown RBP14.88□□□□□ -0.03
CLPX-203ENST00000558958 TRBV6-7A0A0A0MS04 114 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 NAP1L6A6NFF2 107 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 CENPXA8MT69 81 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 RNF223E7ERA6 249 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 F2RL2O00254 374 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 BET1O15155 118 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 ZNF735P0CB33 412 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 PAX2Q02962 417 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 LOXL1Q08397 574 aaPredicted RBP14.88□□□□□ -0.03
CLPX-203ENST00000558958 POC5Q8NA72 575 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 DMRTB1Q96MA1 342 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 SLC6A7Q99884 636 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 MCUBQ9NWR8 336 aa14.88□□□□□ -0.03
CLPX-203ENST00000558958 A0A1W2PPH5 198 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 AMY2AP04746 511 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 IFNA6P05013 189 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 LIPFP07098 398 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 OMGP23515 440 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 BTCP35070 178 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 HTD2P86397 168 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 DHRS11Q6UWP2 260 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 ARRDC1Q8N5I2 433 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 WFDC11Q8NEX6 87 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 SLC23A1Q9UHI7 598 aa14.87□□□□□ -0.03
CLPX-203ENST00000558958 NOTCH2Q04721 2471 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 C17orf98A8MV24 154 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 DISC1C4P0D8 188 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 ENSAO43768 121 aaKnown RBP14.86□□□□□ -0.03
CLPX-203ENST00000558958 FPR2P25090 351 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 ZNF660Q6AZW8 331 aaPredicted RBP14.86□□□□□ -0.03
CLPX-203ENST00000558958 MZT2BQ6NZ67 158 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 HEPN1Q6WQI6 88 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 C11orf42Q8N5U0 333 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 OR10A7Q8NGE5 316 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 OR51S1Q8NGJ8 323 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 OR10J5Q8NHC4 309 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 C1orf159Q96HA4 380 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 OR2S2Q9NQN1 319 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 IDI2-AS1Q9NZ38 188 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 OR1A1Q9P1Q5 309 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 ARHGAP32A7KAX9 2087 aa14.86□□□□□ -0.03
CLPX-203ENST00000558958 IGHV2-70DA0A0C4DH43 119 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 MMP23AO75900 390 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 ZBTB25P24278 435 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 LOXL3P58215 753 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 TSPAN5P62079 268 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 TMEM30BQ3MIR4 351 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 PRAMEF5Q5TYX0 476 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 ZNF782Q6ZMW2 699 aaPredicted RBP14.85□□□□□ -0.03
CLPX-203ENST00000558958 TMEM17Q86X19 198 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 OR52L2PQ8NGH6 319 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 GIMAP1Q8WWP7 306 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 GINS4Q9BRT9 223 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 MMP26Q9NRE1 261 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 SLC2A8Q9NY64 477 aa14.85□□□□□ -0.03
CLPX-203ENST00000558958 HSPA12AO43301 675 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 RBP4P02753 201 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 NFYAP23511 347 aaPredicted RBP14.84□□□□□ -0.03
CLPX-203ENST00000558958 SLC6A1P30531 599 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 FCGR2CP31995 323 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 ERVFRD-1P60508 538 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 LTC4SQ16873 150 aa14.84□□□□□ -0.03
CLPX-203ENST00000558958 FAM53AQ6NSI3 398 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms