RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	SLC16A12	Q6ZSM3	486 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	UTS2B	Q765I0	119 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	ABHD12	Q8N2K0	398 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	PARP16	Q8N5Y8	322 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	DNAAF1	Q8NEP3	725 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	OR5D14	Q8NGL3	314 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	OR4P4	Q8NGL7	312 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	WIPF2	Q8TF74	440 aa	Predicted RBP	5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	TMEM106A	Q96A25	262 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	CPNE2	Q96FN4	548 aa	Predicted RBP	5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	COQ2	Q96H96	371 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	KCTD7	Q96MP8	289 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	DERL3	Q96Q80	235 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	OR14A2	Q96R54	314 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	CHCHD6	Q9BRQ6	235 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	CLEC7A	Q9BXN2	247 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	KRTAP3-1	Q9BYR8	98 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	OR51E2	Q9H255	320 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	ZNF286A	Q9HBT8	521 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	HMG20A	Q9NP66	347 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	TXNL4B	Q9NX01	149 aa	Known RBP	5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	RSL24D1	Q9UHA3	163 aa	Known RBP	5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	LINC00312	Q9Y6C7	94 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	CEPT1	Q9Y6K0	416 aa		5.59	□□□□□ -1.51
MARK3-215	ENST00000558787	NBEAL2	Q6ZNJ1	2754 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TRGV10	A0A0A0MS01	117 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TRAV1-2	A0A0B4J238	106 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	ODAM	A1E959	279 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	FAM90A22P	A8MWA6	464 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	HSPB6	O14558	160 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	PDCD5	O14737	125 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	SH2D1B	O14796	132 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	MGST3	O14880	152 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	DEGS1	O15121	323 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	GPX5	O75715	221 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	IGHV3-7	P01780	117 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TMEM225B	P0DP42	221 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	ZNF44	P15621	663 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	CALR	P27797	417 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	HTR1D	P28221	377 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	RANBP1	P43487	201 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	VDAC2	P45880	294 aa	Predicted RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	OR3A4P	P47883	348 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	SOX2	P48431	317 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	MTNR1B	P49286	362 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	PSMD7	P51665	324 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	DYNLT3	P51808	116 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	PPP3R1	P63098	170 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	SUMO1	P63165	101 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	ATXN7L3	Q14CW9	347 aa	Predicted RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	CTF1	Q16619	201 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TCTEX1D4	Q5JR98	221 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	MINOS1	Q5TGZ0	78 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	C22orf42	Q6IC83	251 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	LHFPL2	Q6ZUX7	228 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TPRA1	Q86W33	373 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	NDUFA11	Q86Y39	141 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787		Q8IYB0	196 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	OR5AU1	Q8NGC0	362 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	OR13C5	Q8NGS8	318 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	LEAP2	Q969E1	77 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	SPSB1	Q96BD6	273 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	ISOC1	Q96CN7	298 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	DGCR14	Q96DF8	476 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	RBM38	Q9H0Z9	239 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	PPIL3	Q9H2H8	161 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	SEBOX	Q9HB31	216 aa	Predicted RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	DPM3	Q9P2X0	92 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	GLS2	Q9UI32	602 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	PITPNC1	Q9UKF7	332 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TMA7	Q9Y2S6	64 aa	Known RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	MINOS1-NBL1	R4GNA1	71 aa		5.58	□□□□□ -1.52
MARK3-215	ENST00000558787	TRAV39	A0A0B4J263	110 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787		A0A1W2PPK0	400 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787		H3BMQ9	156 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	SLC33A1	O00400	549 aa	Predicted RBP	5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	MAGEB3	O15480	346 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	SULT1B1	O43704	296 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	TMEM127	O75204	238 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	KDM4B	O94953	1096 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	IL1A	P01583	271 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	AMY1A	P04745	511 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	AMY2A	P04746	511 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	LPL	P06858	475 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	HCK	P08631	526 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	IGLL1	P15814	213 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	SRM	P19623	302 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	RAB3A	P20336	220 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	NFYB	P25208	207 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	LMO1	P25800	156 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	ERP29	P30040	261 aa	Known RBP	5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	ZP1	P60852	638 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	NCS1	P62166	190 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	LSM3	P62310	102 aa	Known RBP	5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	RBM39	Q14498	530 aa	Known RBP	5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	LTC4S	Q16873	150 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	C21orf62-AS1	Q17RA5	79 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	C17orf58	Q2M2W7	97 aa		5.57	□□□□□ -1.52
MARK3-215	ENST00000558787	ABCA11P	Q4W5N1	156 aa		5.57	□□□□□ -1.52

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