RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZNF714Q96N38 554 aa12.29□□□□□ -0.44
VPS18-202ENST00000558474 SLC25A21Q9BQT8 299 aaPredicted RBP12.29□□□□□ -0.44
VPS18-202ENST00000558474 C19orf12Q9NSK7 152 aa12.29□□□□□ -0.44
VPS18-202ENST00000558474 MCUBQ9NWR8 336 aa12.29□□□□□ -0.44
VPS18-202ENST00000558474 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
VPS18-202ENST00000558474 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 LOC105371242A0A075B767 164 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 hCG_1809904A0A1W2PP81 198 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 A0A1W2PPE2 198 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 A0A1W2PR64 198 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 A0A1W2PRV1 198 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 LIPFP07098 398 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 FPR2P25090 351 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 BTCP35070 178 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 HERPUD1Q15011 391 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
VPS18-202ENST00000558474 C17orf58Q2M2W7 97 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 Q3ZCU0 254 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 TMEM200BQ69YZ2 307 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 ZNF660Q6AZW8 331 aaPredicted RBP12.28□□□□□ -0.44
VPS18-202ENST00000558474 HEPN1Q6WQI6 88 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 TCF23Q7RTU1 214 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 FGFRL1Q8N441 504 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 OR4D10Q8NGI6 311 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 OR56B4Q8NH76 319 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 TERB2Q8NHR7 220 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 SCGB3A2Q96PL1 93 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 FOXC2Q99958 501 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 JPT1Q9UK76 154 aa12.28□□□□□ -0.44
VPS18-202ENST00000558474 TRAV39A0A0B4J263 110 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 PPIAL4CA0A0B4J2A2 164 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 IGKV1-6A0A0C4DH72 117 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 ITGB1BP1O14713 200 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 TUSC2O75896 110 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 RGS11O94810 467 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 PPIAL4GP0DN37 164 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 USF1P22415 310 aaPredicted RBP12.27□□□□□ -0.45
VPS18-202ENST00000558474 SSTR5P35346 364 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 OXA1LQ15070 435 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 SURF2Q15527 256 aaPredicted RBP12.27□□□□□ -0.45
VPS18-202ENST00000558474 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 IGSF11Q5DX21 431 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 Q5PR19 223 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 C1orf122Q6ZSJ8 110 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 NRARPQ7Z6K4 114 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 FAM185AQ8N0U4 392 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 KIR3DL3Q8N743 410 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 OR1L1Q8NH94 360 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 C1orf159Q96HA4 380 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 GINS4Q9BRT9 223 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 NARFLQ9H6Q4 476 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 IDI2-AS1Q9NZ38 188 aa12.27□□□□□ -0.45
VPS18-202ENST00000558474 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 IGHV4-61A0A0C4DH41 118 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 KIAA1324LA8MWY0 1029 aaPredicted RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 M0R1W7 72 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 SDCBPO00560 298 aaPredicted RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 BET1O15155 118 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 ENSAO43768 121 aaKnown RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 YPEL1O60688 119 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 FCGR2CP31995 323 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 UCP3P55916 312 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 DLX6P56179 175 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 LOXL1Q08397 574 aaPredicted RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 ZNF273Q14593 569 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 TRIM16LQ309B1 348 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 FAAP20Q6NZ36 180 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 LPCAT3Q6P1A2 487 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 IDO2Q6ZQW0 420 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 IL1F10Q8WWZ1 152 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 YPEL2Q96QA6 119 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 ZNF2Q9BSG1 426 aaPredicted RBP12.26□□□□□ -0.45
VPS18-202ENST00000558474 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
VPS18-202ENST00000558474 APCP25054 2843 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 TACC2O95359 2948 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 ARID1AO14497 2285 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 HSPA12AO43301 675 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 NDUFB6O95139 128 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 TCRBP04435 133 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 RAG2P55895 527 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 LOXL3P58215 753 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 SCGB2B2Q4G0G5 96 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 EDARADDQ8WWZ3 215 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 DACT3Q96B18 629 aaPredicted RBP12.25□□□□□ -0.45
VPS18-202ENST00000558474 CREB3L1Q96BA8 519 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 MOB3AQ96BX8 217 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 GHITMQ9H3K2 345 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 OCEL1Q9H607 264 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms