RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 OR4P4Q8NGL7 312 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 OR10R2Q8NGX6 335 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 OR9G1Q8NH87 305 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 OR1L1Q8NH94 360 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 LGALS14Q8TCE9 139 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 SSMEM1Q8WWF3 244 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 RAB3CQ96E17 227 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 MALSU1Q96EH3 234 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 HDHD3Q9BSH5 251 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-206ENST00000558471 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 ATG5Q9H1Y0 275 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 TAF9BQ9HBM6 251 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 PSG11Q9UQ72 335 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 KCNK7Q9Y2U2 307 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 POMT1Q9Y6A1 747 aa10.12□□□□□ -0.79
LRRC28-206ENST00000558471 COL6A5A8TX70 2615 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 IGHV3-43A0A0B4J1X8 118 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 J3QR06 171 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 F2RL2O00254 374 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 SDCBPO00560 298 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-206ENST00000558471 TOR1AO14656 332 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 HBZP02008 142 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 IGHV3-43DP0DP04 118 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 HTR1DP28221 377 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 SERPINB10P48595 397 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 PRRX1P54821 245 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 CTF1Q16619 201 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 GPR107Q5VW38 600 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 C16orf87Q6PH81 154 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 GPR141Q7Z602 305 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 PRR18Q8N4B5 295 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 ZNF596Q8TC21 504 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 SSX3Q99909 188 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 CHIAQ9BZP6 476 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 DPAGT1Q9H3H5 408 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 ZMAT3Q9HA38 289 aaKnown RBP10.11□□□□□ -0.79
LRRC28-206ENST00000558471 CHMP1AQ9HD42 196 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-206ENST00000558471 KCNIP1Q9NZI2 227 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 HILPDAQ9Y5L2 63 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
LRRC28-206ENST00000558471 A0A075B6Q4 140 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 TRBV6-6A0A0A6YYG2 114 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 A0A1W2PPE3 182 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 BUB1B-PAK6H3BSN5 160 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 SPINT2O43291 252 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 GABARAPO95166 117 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 GNB3P16520 340 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 GNG10P50151 68 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 SCAND1P57086 179 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 PLA1AQ53H76 456 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 ZNF880Q6PDB4 577 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 ZNF554Q86TJ5 538 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 CROCCP3Q8IVE0 287 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 NDNFQ8TB73 568 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 SETD6Q8TBK2 473 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
LRRC28-206ENST00000558471 RIMS4Q9H426 269 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-206ENST00000558471 GFOD1Q9NXC2 390 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 DPM3Q9P2X0 92 aa10.1□□□□□ -0.79
LRRC28-206ENST00000558471 LEUTXA8MZ59 168 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 LY6LH3BQJ8 138 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 H3BUX3 64 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 MFNGO00587 321 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 TMEM127O75204 238 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 HIST1H1DP16402 221 aaKnown RBP10.09□□□□□ -0.79
LRRC28-206ENST00000558471 RAB13P51153 203 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 HMGN3Q15651 99 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 AANATQ16613 207 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 OR52L2PQ8NGH6 319 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 PIFOQ8TCI5 191 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 TAF15Q92804 592 aaKnown RBP eCLIP10.09□□□□□ -0.79
LRRC28-206ENST00000558471 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 SLC25A38Q96DW6 304 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 MMP28Q9H239 520 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 Q9N2K0 584 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 RHBDL2Q9NX52 303 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 ABRACLQ9P1F3 81 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 SPATA2Q9UM82 520 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 ETV7Q9Y603 341 aa10.09□□□□□ -0.79
LRRC28-206ENST00000558471 BTBD17A6NE02 478 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 VGLL3A8MV65 326 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 GPR137BO60478 399 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 CD3GP09693 182 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 RPL5P46777 297 aaKnown RBP10.08□□□□□ -0.8
LRRC28-206ENST00000558471 ZNF134P52741 427 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 TMEM30BQ3MIR4 351 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 CDNFQ49AH0 187 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 MORN2Q502X0 79 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 TPTE2P1Q5T6R2 138 aa10.08□□□□□ -0.8
LRRC28-206ENST00000558471 OR10V1Q8NGI7 309 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms