RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 EDDM3AQ14507 147 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 FAM201AQ5SY85 155 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 GSG1LQ6UXU4 331 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 CMTM1Q8IZ96 169 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 ZCCHC24Q8N2G6 241 aaKnown RBP10.42□□□□□ -0.74
SHMT2-233ENST00000557529 PRR18Q8N4B5 295 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 MRGPRDQ8TDS7 321 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 OR1A1Q9P1Q5 309 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 MAB21L2Q9Y586 359 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 PPIAL4EA0A075B759 164 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 B8ZZF3 427 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 PPIAL4DF5H284 164 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 SIGLEC5O15389 551 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 CD8AP01732 235 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 HBZP02008 142 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 PPIAL4FP0DN26 164 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 SRPXP78539 464 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 CYCSP99999 105 aaKnown RBP10.41□□□□□ -0.74
SHMT2-233ENST00000557529 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF788Q6ZQV5 615 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 ZNRF1Q8ND25 227 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 DEFB108BQ8NET1 73 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 OR10V1Q8NGI7 309 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 OR13A1Q8NGR1 328 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 OR1L1Q8NH94 360 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 NINJ1Q92982 152 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 GAFA1Q96PS6 74 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 TOLLIPQ9H0E2 274 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 RDH8Q9NYR8 311 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 PPIAL4AQ9Y536 164 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 ICE1Q9Y2F5 2266 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 HIVEP3Q5T1R4 2406 aa10.41□□□□□ -0.74
SHMT2-233ENST00000557529 IGKV1D-13A0A0B4J2D9 117 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 IGHV1-69-2A0A0G2JMI3 117 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 C5orf51A6NDU8 294 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 G3V3Q6 166 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 CCSO14618 274 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 MPPED1O15442 326 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 B3GALNT1O75752 331 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 GYPAP02724 150 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 IGKV1-13P0DP09 117 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 CEACAM6P40199 344 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 HCFC1P51610 2035 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 TMEM187Q14656 261 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 FAM216AQ8WUB2 273 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 CCL17Q92583 94 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 ARL11Q969Q4 196 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 C14orf79Q96F83 325 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 AKR1E2Q96JD6 320 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 CCL13Q99616 98 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 METTL8Q9H825 291 aaKnown RBP10.4□□□□□ -0.74
SHMT2-233ENST00000557529 CCL28Q9NRJ3 127 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 COMMD9Q9P000 198 aa10.4□□□□□ -0.74
SHMT2-233ENST00000557529 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 C3orf85A0A1B0GTC6 90 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 IFNA21P01568 189 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 EDDM3BP56851 147 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 HTD2P86397 168 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 HFEQ30201 348 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 Q5BKY6 102 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF818PQ6ZRF7 136 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 TGIF2LYQ8IUE0 185 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 LGI3Q8N145 548 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 TPRX1Q8N7U7 411 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-233ENST00000557529 BVESQ8NE79 360 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 NMES1Q9C002 83 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 CBLN4Q9NTU7 201 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 HSPB11Q9Y547 144 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 RBM7Q9Y580 266 aaKnown RBP10.39□□□□□ -0.75
SHMT2-233ENST00000557529 DYSFO75923 2080 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 USP24Q9UPU5 2620 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 ROS1P08922 2347 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 CACNA1DQ01668 2161 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 C13orf42A0A1B0GVH6 325 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 HSD17B6O14756 317 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 PHF1O43189 567 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-233ENST00000557529 NDUFA2O43678 99 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 FSTL3O95633 263 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 WNT2P09544 360 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 IGFBP2P18065 325 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 C4BPBP20851 252 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 SSTR5P35346 364 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 MSMO1Q15800 293 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms