RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MMP28Q9H239 520 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
VPS33B-206ENST00000557358 A6NHS1 94 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-206ENST00000557358 TIMM23O14925 209 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 ARSBP15848 533 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 VBP1P61758 197 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 MADCAM1Q13477 382 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 RAB11BQ15907 218 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 ZNF497Q6ZNH5 498 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 OR52M1Q8NGK5 317 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 CCDC107Q8WV48 283 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 TAF15Q92804 592 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS33B-206ENST00000557358 TOMM40LQ969M1 308 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 RNF167Q9H6Y7 350 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
VPS33B-206ENST00000557358 FBLN5Q9UBX5 448 aa11.16□□□□□ -0.62
VPS33B-206ENST00000557358 NPIPB11E5RHQ5 1161 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 H3BMQ9 156 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 J3QR06 171 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 SDCBPO00560 298 aaPredicted RBP11.15□□□□□ -0.62
VPS33B-206ENST00000557358 SLC17A2O00624 439 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 SLC22A1O15245 554 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 IGLV1-47P01700 117 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 MT-ND4P03905 459 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 FAM106CPP0CH98 169 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 PAX6P26367 422 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 SSTR5P35346 364 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 KIR2DS4P43632 304 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 NCS1P62166 190 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 TPTE2P1Q5T6R2 138 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 OR2W3Q7Z3T1 314 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 TMEM104Q8NE00 496 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 CHMP1AQ9HD42 196 aaPredicted RBP11.15□□□□□ -0.62
VPS33B-206ENST00000557358 PLEKHJ1Q9NW61 149 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 V9GY05 133 aa11.15□□□□□ -0.62
VPS33B-206ENST00000557358 TRAV1-2A0A0B4J238 106 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 TRAV39A0A0B4J263 110 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 UBE2QL1A1L167 161 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 A6NDX4 124 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 M0QZ24 198 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 CGB3P0DN86 165 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 CGB7P0DN87 165 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 VSIG8P0DPA2 414 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 TGFBR1P36897 503 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 SERPINB10P48595 397 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 GNG10P50151 68 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 RAB7AP51149 207 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 RAB13P51153 203 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 RPS27AP62979 156 aaKnown RBP11.14□□□□□ -0.63
VPS33B-206ENST00000557358 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
VPS33B-206ENST00000557358 Q3ZCU0 254 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 FOXB2Q5VYV0 432 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 Q6ZTK2 550 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 LYPD6Q86Y78 171 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 DYNAPQ8N1N2 210 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 OR4K15Q8NH41 348 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 ABRACLQ9P1F3 81 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 PSG11Q9UQ72 335 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 AK6Q9Y3D8 172 aaKnown RBP11.14□□□□□ -0.63
VPS33B-206ENST00000557358 ANK2Q01484 3957 aa11.14□□□□□ -0.63
VPS33B-206ENST00000557358 M0QZK8 103 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 RGS11O94810 467 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 BLVRBP30043 206 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-206ENST00000557358 GDNFP39905 211 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 PROK1P58294 105 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 P2RY14Q15391 338 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
VPS33B-206ENST00000557358 DCSTAMPQ9H295 470 aa11.13□□□□□ -0.63
VPS33B-206ENST00000557358 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-206ENST00000557358 TENM1Q9UKZ4 2725 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
VPS33B-206ENST00000557358 SDC2P34741 201 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 SPCS2Q15005 226 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 MOB1BQ7L9L4 216 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 TPRA1Q86W33 373 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 TM2D1Q9BX74 207 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 LIN7BQ9HAP6 207 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
VPS33B-206ENST00000557358 ZNF581Q9P0T4 197 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms