RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 C16orf47Q6ZP98 133 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 TMEM17Q86X19 198 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 MS4A15Q8N5U1 240 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 FAM83FQ8NEG4 500 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 NOXO1Q8NFA2 376 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OR2M7Q8NG81 312 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OR52E2Q8NGJ4 325 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OR9Q1Q8NGQ5 310 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OR51A7Q8NH64 312 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 C7orf33Q8WU49 177 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ASB17Q8WXJ9 295 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 CPNE4Q96A23 557 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 TMIGD2Q96BF3 282 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 C12orf43Q96C57 262 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 SMIM19Q96E16 107 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ZHX1-C8orf76Q96EF9 292 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 TMEM101Q96IK0 257 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ARL5BQ96KC2 179 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 Q96M85 177 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OPALINQ96PE5 141 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 TSPAN32Q96QS1 320 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 OR5B2Q96R09 309 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 MGLLQ99685 303 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 KLHDC3Q9BQ90 382 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 NXF2Q9GZY0 626 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 NIPAL2Q9H841 368 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 LIN28AQ9H9Z2 209 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 PALMDQ9NP74 551 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 GLRX2Q9NS18 164 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 STMN3Q9NZ72 180 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 CCDC59Q9P031 241 aaKnown RBP2.28□□□□□ -2.04
VRK1-207ENST00000557352 MED11Q9P086 117 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 SPRR3Q9UBC9 169 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ATPIF1Q9UII2 106 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 DKKL1Q9UK85 242 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 IER3IP1Q9Y5U9 82 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 DSCAMO60469 2012 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ASPMQ8IZT6 3477 aa2.28□□□□□ -2.04
VRK1-207ENST00000557352 ZZEF1O43149 2961 aa2.28□□□□□ -2.05
VRK1-207ENST00000557352 A0A075B6Q4 140 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TRAV1-2A0A0B4J238 106 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PPIAL4CA0A0B4J2A2 164 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 A0A0G2JMM0 328 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 A0A1W2PPB8 328 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 A0A1W2PQL4 384 aaPredicted RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 A0A1W2PRS3 328 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 FAM183AA6NL82 134 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TMEM212A6NML5 194 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF716A6NP11 495 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 C17orf51A8MQB3 221 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 C12orf71A8MTZ7 269 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 KIR3DP1A8MWS1 328 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 LRRN3E7EW58 273 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF670-ZNF695F2Z2N8 137 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 H3BSA7 217 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 K7ENP7 123 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 M0R129 80 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RNF13O43567 381 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 AIREO43918 545 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 GATBO75879 557 aaKnown RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 SERPINA3P01011 423 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 HLA-DPB1P04440 258 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ISG15P05161 165 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ADRA2AP08913 450 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TACSTD2P09758 323 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PPIAL4GP0DN37 164 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CTLA4P16410 223 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CD36P16671 472 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ZNF43P17038 809 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 NPR2P20594 1047 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PAX7P23759 505 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PSMB9P28065 219 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OTX1P32242 354 aaPredicted RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 CTRLP40313 264 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CRYBB2P43320 205 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RANBP1P43487 201 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SERPINB10P48595 397 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 DNASE1L1P49184 302 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ETV1P50549 477 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CLDN6P56747 220 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CLDN18P56856 261 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 ERVK-25P63136 954 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RIPPLY1Q0D2K3 151 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CDK5R1Q15078 307 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 OR7A5Q15622 319 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SSX1Q16384 188 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TMEM176BQ3YBM2 270 aaPredicted RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 YIF1BQ5BJH7 314 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PRAMEF20Q5VT98 475 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RAET1LQ5VY80 246 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 PVRIGQ6DKI7 326 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 RPL22L1Q6P5R6 122 aaKnown RBP2.27□□□□□ -2.05
VRK1-207ENST00000557352 PLEKHG7Q6ZR37 379 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 Q6ZS92 163 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 Q6ZSR3 168 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 SLC35D2Q76EJ3 337 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 DPPA2Q7Z7J5 298 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 TPRA1Q86W33 373 aa2.27□□□□□ -2.05
VRK1-207ENST00000557352 CLVS1Q8IUQ0 354 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms