RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 SIRT4Q9Y6E7 314 aaPredicted RBP14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 A0A1W2PP11 408 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 TXNL1O43396 289 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 CSTBP04080 98 aaKnown RBP14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 SOX6P35712 828 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF93P35789 620 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF137PP52743 207 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 F2RL1P55085 397 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 Q3ZCU0 254 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ATAD3CQ5T2N8 411 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 XAF1Q6GPH4 301 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF439Q8NDP4 499 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 TMEM106AQ96A25 262 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 KCTD7Q96MP8 289 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF580Q9UK33 172 aa14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF256Q9Y2P7 627 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-209ENST00000556909 C12orf77C9JDV5 145 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 C3orf84H3BNL1 204 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 AIPO00170 330 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 ATP5HO75947 161 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 MT-ND4P03905 459 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 IGF1P05019 195 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 LIMS3P0CW19 117 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 LIMS4P0CW20 117 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 PPP3R1P63098 170 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF260Q3ZCT1 412 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 SLC25A48Q6ZT89 311 aaKnown RBP14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 CBR4Q8N4T8 237 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 RHOXF1Q8NHV9 184 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 MYOZ3Q8TDC0 251 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 NEK7Q8TDX7 302 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 Q96MT0 163 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 SACSQ9NZJ4 4579 aa14.27□□□□□ -0.13
VIPAS39-209ENST00000556909 H3BNX3 289 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 CHATP28329 748 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 BDKRB2P30411 391 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 VHLP40337 213 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 OR11H1Q8NG94 326 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 S100A13Q99584 98 aa14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 MRPS18AQ9NVS2 196 aaKnown RBP14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF107Q9UII5 783 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-209ENST00000556909 RYR2Q92736 4967 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF780AO75290 641 aaPredicted RBP14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 SLC2A2P11168 524 aaPredicted RBP14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 MYF6P23409 242 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF134P52741 427 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 SLC22A6Q4U2R8 563 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 CCDC58Q4VC31 144 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 CT45A1Q5HYN5 189 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 RPL22L1Q6P5R6 122 aaKnown RBP14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 STX19Q8N4C7 294 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 OR10V1Q8NGI7 309 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 CT45A3Q8NHU0 189 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 APH1BQ8WW43 257 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 ORAI1Q96D31 301 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 GNB4Q9HAV0 340 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 RCC2Q9P258 522 aaKnown RBP14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 GNG12Q9UBI6 72 aa14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 RPL36Q9Y3U8 105 aaKnown RBP14.25□□□□□ -0.13
VIPAS39-209ENST00000556909 SPINT2O43291 252 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 GTF2F2P13984 249 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 LSAMPQ13449 338 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 TMEM30BQ3MIR4 351 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 SYT6Q5T7P8 510 aaPredicted RBP14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 OR1L1Q8NH94 360 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 ZNF184Q99676 751 aaPredicted RBP14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 TRAPPC2LQ9UL33 140 aa14.24□□□□□ -0.13
VIPAS39-209ENST00000556909 MAGEA13PA6NCF6 341 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 I3L521 148 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 LY86O95711 162 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 HBZP02008 142 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 OR8U8P0C7N1 319 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 IGFBP3P17936 291 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 RIPK1Q13546 671 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 KIAA0141Q14154 515 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 MMDQ15546 238 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 C6orf183Q5T699 404 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 PRR18Q8N4B5 295 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 OR13C5Q8NGS8 318 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 OR4K15Q8NH41 348 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 UBE2E2Q96LR5 201 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 KLK15Q9H2R5 256 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 SPACA1Q9HBV2 294 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 RAB9BQ9NP90 201 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 FGF20Q9NP95 211 aaPredicted RBP14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 ETAA1Q9NY74 926 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 FAM53CQ9NYF3 392 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 SMAD5-AS1Q9Y6J3 95 aa14.23□□□□□ -0.13
VIPAS39-209ENST00000556909 G3V318 75 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 LANCL1O43813 399 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 PPIFP30405 207 aaKnown RBP14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 ETV1P50549 477 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 INSL3P51460 131 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 GNB1P62873 340 aa14.22□□□□□ -0.13
VIPAS39-209ENST00000556909 RUNX1Q01196 453 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms