RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 F2RL2O00254 374 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 LDLRAD4O15165 306 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 RRP9O43818 475 aaKnown RBP18.41■□□□□ 0.54
TDP1-216ENST00000556867 CHST1O43916 411 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 JUNBP17275 347 aaPredicted RBP18.41■□□□□ 0.54
TDP1-216ENST00000556867 RAB3BP20337 219 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 NEDD8Q15843 81 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 TMEM30BQ3MIR4 351 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 TPTE2P1Q5T6R2 138 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 HES5Q5TA89 166 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 C6orf201Q7Z4U5 140 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 FAM89BQ8N5H3 189 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 LINC01006Q8NI28 216 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 MRPL30Q8TCC3 161 aaKnown RBP18.41■□□□□ 0.54
TDP1-216ENST00000556867 PITPNC1Q9UKF7 332 aa18.41■□□□□ 0.54
TDP1-216ENST00000556867 IFITM5A6NNB3 132 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 OOSP1A8MZH6 123 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 SDCBPO00560 298 aaPredicted RBP18.4■□□□□ 0.54
TDP1-216ENST00000556867 IGHV3-7P01780 117 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 RCC1P18754 421 aaPredicted RBP18.4■□□□□ 0.54
TDP1-216ENST00000556867 BLVRBP30043 206 aaPredicted RBP18.4■□□□□ 0.54
TDP1-216ENST00000556867 ARHGDIBP52566 201 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 LOXL3P58215 753 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 C2orf76Q3KRA6 126 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 SHISA2Q6UWI4 295 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 CCBE1Q6UXH8 406 aaPredicted RBP18.4■□□□□ 0.54
TDP1-216ENST00000556867 ZNF554Q86TJ5 538 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 UBALD1Q8TB05 177 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 FAAP24Q9BTP7 215 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 RANBP3Q9H6Z4 567 aaPredicted RBP18.4■□□□□ 0.54
TDP1-216ENST00000556867 GFOD1Q9NXC2 390 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 SSR3Q9UNL2 185 aa18.4■□□□□ 0.54
TDP1-216ENST00000556867 FOXI3A8MTJ6 420 aaPredicted RBP18.39■□□□□ 0.53
TDP1-216ENST00000556867 SPINT2O43291 252 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 TNFAIP8O95379 198 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 GNG10P50151 68 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 C8orf31Q8N9H6 132 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 WFDC12Q8WWY7 111 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 RNF114Q9Y508 228 aa18.39■□□□□ 0.53
TDP1-216ENST00000556867 TMEM272A0A1B0GTI8 110 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 SOCS1O15524 211 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 HBZP02008 142 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 BRS3P32247 399 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 Q3ZCU0 254 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 CCDC144NLQ6NUI1 221 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 NR2C2APQ86WQ0 139 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 NPFFR1Q9GZQ6 430 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 OR51E2Q9H255 320 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 TAF9BQ9HBM6 251 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 PLEKHJ1Q9NW61 149 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 HSF4Q9ULV5 492 aa18.38■□□□□ 0.53
TDP1-216ENST00000556867 A0A087WXM4 84 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 NAPSAO96009 420 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 PROK1P58294 105 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 MADCAM1Q13477 382 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 TPRA1Q86W33 373 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 TMEM219Q86XT9 240 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 LINC00311Q8N616 119 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 TSPAN14Q8NG11 270 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 OR4C13Q8NGP0 309 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 OR1L1Q8NH94 360 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 TOMM40LQ969M1 308 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 RPEQ96AT9 228 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 KCNIP1Q9NZI2 227 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 RAB22AQ9UL26 194 aa18.37■□□□□ 0.53
TDP1-216ENST00000556867 IGHV3-43A0A0B4J1X8 118 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 IGHV3-43DP0DP04 118 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 MNDAP41218 407 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 OR56B1Q8NGI3 324 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 OR10X1Q8NGY0 326 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 ZNF696Q9H7X3 374 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 LIN7BQ9HAP6 207 aa18.36■□□□□ 0.53
TDP1-216ENST00000556867 CD36P16671 472 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 GADD45AP24522 165 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 KIR2DS4P43632 304 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 VEGFCP49767 419 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 TMEM50BP56557 158 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 PLA2G7Q13093 441 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 FAM53AQ6NSI3 398 aaPredicted RBP18.35■□□□□ 0.53
TDP1-216ENST00000556867 ZNF880Q6PDB4 577 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 PRR18Q8N4B5 295 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 KCTD7Q96MP8 289 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 OCSTAMPQ9BR26 566 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 CHCHD6Q9BRQ6 235 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 RIMS4Q9H426 269 aaPredicted RBP18.35■□□□□ 0.53
TDP1-216ENST00000556867 GNG12Q9UBI6 72 aa18.35■□□□□ 0.53
TDP1-216ENST00000556867 TRBV6-6A0A0A6YYG2 114 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 A0A1W2PPE3 182 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 NOTOA8MTQ0 251 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 RAB6AP20340 208 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 HMGN3Q15651 99 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 Q6ZPA2 131 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 MOB1BQ7L9L4 216 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 DTX3Q8N9I9 347 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 ZNF439Q8NDP4 499 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 ARHGAP5-AS1Q96IT6 56 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 VCX3AQ9NNX9 186 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 AK3Q9UIJ7 227 aa18.34■□□□□ 0.53
TDP1-216ENST00000556867 A0A1W2PPI3 338 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 SMIM30A4D0T7 59 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms