RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SLC16A12Q6ZSM3 486 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 OVCH2Q7RTZ1 564 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 C4orf3Q8WVX3 66 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 ST6GALNAC6Q969X2 333 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 TMEM106AQ96A25 262 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 GON7Q9BXV9 100 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
CHD8-211ENST00000556833 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
CHD8-211ENST00000556833 DYNC2H1Q8NCM8 4307 aaKnown RBP11.52□□□□□ -0.56
CHD8-211ENST00000556833 C12orf77C9JDV5 145 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 CD2P06729 351 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ELANEP08246 267 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 GZMHP20718 246 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 CD1BP29016 333 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ALDH3A2P51648 485 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ZNF134P52741 427 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 GNB1P62873 340 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 GNMTQ14749 295 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 MMDQ15546 238 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 SMN1Q16637 294 aaKnown RBP11.52□□□□□ -0.57
CHD8-211ENST00000556833 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
CHD8-211ENST00000556833 OR2G6Q5TZ20 316 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ASCL4Q6XD76 172 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ZNF497Q6ZNH5 498 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 FAM71E2Q8N5Q1 922 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 LINC00311Q8N616 119 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 GPR148Q8TDV2 347 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 CASTOR1Q8WTX7 329 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ALX4Q9H161 411 aaPredicted RBP11.52□□□□□ -0.57
CHD8-211ENST00000556833 PARP11Q9NR21 331 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 ZNF107Q9UII5 783 aaPredicted RBP11.52□□□□□ -0.57
CHD8-211ENST00000556833 TRAPPC2LQ9UL33 140 aa11.52□□□□□ -0.57
CHD8-211ENST00000556833 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.57
CHD8-211ENST00000556833 H3BNX3 289 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 IGHG4P01861 327 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 MT-ND4P03905 459 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 LIMS3P0CW19 117 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 LIMS4P0CW20 117 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 PSMB8P28062 276 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 BDKRB2P30411 391 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 VHLP40337 213 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 ETV1P50549 477 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 RASSF2P50749 326 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 PAX5Q02548 391 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 SLC25A48Q6ZT89 311 aaKnown RBP11.51□□□□□ -0.57
CHD8-211ENST00000556833 STX19Q8N4C7 294 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 ZFP41Q8N8Y5 198 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 Q8NFD4 153 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 MUL1Q969V5 352 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 RITA1Q96K30 269 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 ZNF184Q99676 751 aaPredicted RBP11.51□□□□□ -0.57
CHD8-211ENST00000556833 BANF2Q9H503 90 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 TMEM138Q9NPI0 162 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 DNAH7Q8WXX0 4024 aa11.51□□□□□ -0.57
CHD8-211ENST00000556833 A0A1W2PPK0 400 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 ATP6V0E1O15342 81 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 HBZP02008 142 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
CHD8-211ENST00000556833 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
CHD8-211ENST00000556833 RAB40BQ12829 278 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 FHL3Q13643 280 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 TMEM65Q6PI78 240 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 RNF152Q8N8N0 203 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 APH1BQ8WW43 257 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
CHD8-211ENST00000556833 IFT22Q9H7X7 185 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 ISYNA1Q9NPH2 558 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
CHD8-211ENST00000556833 PNMA8CA0A1B0GUJ8 204 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 UBE2QL1A1L167 161 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 C3orf84H3BNL1 204 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 SPINT2O43291 252 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 ORC5O43913 435 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 SAP30O75446 220 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 SLURP1P55000 103 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 GABPB1Q06547 395 aaPredicted RBP11.49□□□□□ -0.57
CHD8-211ENST00000556833 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
CHD8-211ENST00000556833 LSAMPQ13449 338 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 RIPK1Q13546 671 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 MPV17LQ2QL34 196 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 NHLRC3Q5JS37 347 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 RAB12Q6IQ22 244 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 JAGN1Q8N5M9 183 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 RHOXF1Q8NHV9 184 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 DCUN1D4Q92564 292 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 Q96MT0 163 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
CHD8-211ENST00000556833 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
CHD8-211ENST00000556833 SLC29A1Q99808 456 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms