RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 A0A1W2PPK0 400 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 G3V4G9 280 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 H0YHG0 523 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 SDCBPO00560 298 aaPredicted RBP10.02□□□□□ -0.81
SNX6-207ENST00000556303 HSD17B6O14756 317 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 CRTAPO75718 401 aaPredicted RBP10.02□□□□□ -0.81
SNX6-207ENST00000556303 CD37P11049 281 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 MGMTP16455 207 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 TMEM11P17152 192 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 CD1BP29016 333 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 SLC6A1P30531 599 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 RANBP1P43487 201 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 GNG10P50151 68 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 ZNF137PP52743 207 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 HES1Q14469 280 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 LTC4SQ16873 150 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 TMEM95Q3KNT9 176 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 ACSM3Q53FZ2 586 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 SYT6Q5T7P8 510 aaPredicted RBP10.02□□□□□ -0.81
SNX6-207ENST00000556303 IZUMO1Q8IYV9 350 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 COMMD1Q8N668 190 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 C5orf56Q8N8D9 126 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 CHPT1Q8WUD6 406 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 LEAP2Q969E1 77 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 SELENOIQ9C0D9 397 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 MBNL3Q9NUK0 354 aaKnown RBP10.02□□□□□ -0.81
SNX6-207ENST00000556303 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
SNX6-207ENST00000556303 TRAV39A0A0B4J263 110 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 PDCD6O75340 191 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 IGHV3-7P01780 117 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 SPHARQ15513 63 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 SLC25A48Q6ZT89 311 aaKnown RBP10.01□□□□□ -0.81
SNX6-207ENST00000556303 C1QL4Q86Z23 238 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 TGIF2LXQ8IUE1 241 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 LYG1Q8N1E2 194 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 OR8H1Q8NGG4 311 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 OR2T10Q8NGZ9 312 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 CCDC107Q8WV48 283 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 ISYNA1Q9NPH2 558 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 TPRKBQ9Y3C4 175 aa10.01□□□□□ -0.81
SNX6-207ENST00000556303 PSMB11A5LHX3 300 aa10□□□□□ -0.81
SNX6-207ENST00000556303 C12orf77C9JDV5 145 aa10□□□□□ -0.81
SNX6-207ENST00000556303 PTGES3LE9PB15 166 aa10□□□□□ -0.81
SNX6-207ENST00000556303 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
SNX6-207ENST00000556303 BPNT1O95861 308 aa10□□□□□ -0.81
SNX6-207ENST00000556303 IGKV1D-33P01593 117 aa10□□□□□ -0.81
SNX6-207ENST00000556303 IGKV1-33P01594 117 aa10□□□□□ -0.81
SNX6-207ENST00000556303 IGHG2P01859 326 aa10□□□□□ -0.81
SNX6-207ENST00000556303 PF4V1P10720 104 aa10□□□□□ -0.81
SNX6-207ENST00000556303 SRMP19623 302 aa10□□□□□ -0.81
SNX6-207ENST00000556303 SLC35A2P78381 396 aa10□□□□□ -0.81
SNX6-207ENST00000556303 HTD2P86397 168 aa10□□□□□ -0.81
SNX6-207ENST00000556303 GABPB1Q06547 395 aaPredicted RBP10□□□□□ -0.81
SNX6-207ENST00000556303 DIAPH2-AS1Q14236 149 aa10□□□□□ -0.81
SNX6-207ENST00000556303 IRF3Q14653 427 aa10□□□□□ -0.81
SNX6-207ENST00000556303 TRAM1Q15629 374 aa10□□□□□ -0.81
SNX6-207ENST00000556303 FBLN7Q53RD9 439 aa10□□□□□ -0.81
SNX6-207ENST00000556303 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
SNX6-207ENST00000556303 C1orf100Q5SVJ3 147 aa10□□□□□ -0.81
SNX6-207ENST00000556303 MOB3BQ86TA1 216 aa10□□□□□ -0.81
SNX6-207ENST00000556303 TMEM104Q8NE00 496 aa10□□□□□ -0.81
SNX6-207ENST00000556303 KCNG3Q8TAE7 436 aa10□□□□□ -0.81
SNX6-207ENST00000556303 RTN4IP1Q8WWV3 396 aaPredicted RBP10□□□□□ -0.81
SNX6-207ENST00000556303 GON7Q9BXV9 100 aa10□□□□□ -0.81
SNX6-207ENST00000556303 VCX3BQ9H321 246 aa10□□□□□ -0.81
SNX6-207ENST00000556303 BANF2Q9H503 90 aa10□□□□□ -0.81
SNX6-207ENST00000556303 ZFP57Q9NU63 452 aa10□□□□□ -0.81
SNX6-207ENST00000556303 KCNIP1Q9NZI2 227 aa10□□□□□ -0.81
SNX6-207ENST00000556303 GNG12Q9UBI6 72 aa10□□□□□ -0.81
SNX6-207ENST00000556303 LSM2Q9Y333 95 aaKnown RBP10□□□□□ -0.81
SNX6-207ENST00000556303 MOSP00540 346 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 HBZP02008 142 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 UCHL1P09936 223 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 CD33P20138 364 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 PSMA1P25786 263 aaKnown RBP9.99□□□□□ -0.81
SNX6-207ENST00000556303 GP2P55259 537 aaKnown RBP9.99□□□□□ -0.81
SNX6-207ENST00000556303 SLC35B1P78383 322 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 C9orf152Q5JTZ5 239 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 HIST2H2BDQ6DRA6 164 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 SIGIRRQ6IA17 410 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 LRRTM1Q86UE6 522 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 FOXRED2Q8IWF2 684 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 Q8N6K4 173 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 ZNF439Q8NDP4 499 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 OR51D1Q8NGF3 324 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 OR4K15Q8NH41 348 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 UFD1Q92890 307 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
SNX6-207ENST00000556303 NEDD4LQ96PU5 975 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 DUSP21Q9H596 190 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 LIN7CQ9NUP9 197 aaKnown RBP9.99□□□□□ -0.81
SNX6-207ENST00000556303 NECAP2Q9NVZ3 263 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 JPT1Q9UK76 154 aa9.99□□□□□ -0.81
SNX6-207ENST00000556303 A0A1W2PPE3 182 aa9.98□□□□□ -0.81
SNX6-207ENST00000556303 SLC22A1O15245 554 aa9.98□□□□□ -0.81
SNX6-207ENST00000556303 LANCL1O43813 399 aa9.98□□□□□ -0.81
SNX6-207ENST00000556303 YPEL1O60688 119 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms