RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 H0YHG0 523 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 AIPO00170 330 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 CCL24O00175 119 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 AP4M1O00189 453 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 ORC5O43913 435 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 VHLP40337 213 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 F2RL1P55085 397 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 RPS11P62280 158 aaKnown RBP eCLIP10.41□□□□□ -0.74
TGFB3-204ENST00000556285 PNLIPRP3Q17RR3 467 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 MPV17LQ2QL34 196 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 CT45A1Q5HYN5 189 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 TEX38Q6PEX7 206 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 PQLC1Q8N2U9 271 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 COMMD1Q8N668 190 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 ZNF439Q8NDP4 499 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 OR10V1Q8NGI7 309 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 OR4K15Q8NH41 348 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 OR1L1Q8NH94 360 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 CT45A3Q8NHU0 189 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 GHSRQ92847 366 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 MUL1Q969V5 352 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 SMIM19Q96E16 107 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
TGFB3-204ENST00000556285 GPR61Q9BZJ8 451 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.41□□□□□ -0.74
TGFB3-204ENST00000556285 LIN7CQ9NUP9 197 aaKnown RBP10.41□□□□□ -0.74
TGFB3-204ENST00000556285 BABAM2Q9NXR7 383 aa10.41□□□□□ -0.74
TGFB3-204ENST00000556285 MOSP00540 346 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 DCKP27707 260 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 CD1BP29016 333 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 DGCR2P98153 550 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 CFHR3Q02985 330 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 RIPK1Q13546 671 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 GPR50Q13585 617 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 DOC2BQ14184 412 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 SYT6Q5T7P8 510 aaPredicted RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 DMKNQ6E0U4 476 aaPredicted RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 TMPRSS11AQ6ZMR5 421 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 SLC25A48Q6ZT89 311 aaKnown RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 PRR18Q8N4B5 295 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 C8orf31Q8N9H6 132 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 S1PR3Q99500 378 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 S100A13Q99584 98 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 BANF2Q9H503 90 aa10.4□□□□□ -0.74
TGFB3-204ENST00000556285 RCC2Q9P258 522 aaKnown RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.74
TGFB3-204ENST00000556285 GPX5O75715 221 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 HBZP02008 142 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 GTF2F2P13984 249 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
TGFB3-204ENST00000556285 SLC6A1P30531 599 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 ADARB1P78563 741 aaKnown RBP10.39□□□□□ -0.75
TGFB3-204ENST00000556285 FOXE3Q13461 319 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 CXorf66Q5JRM2 361 aaPredicted RBP10.39□□□□□ -0.75
TGFB3-204ENST00000556285 NKAPLQ5M9Q1 402 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 RAB12Q6IQ22 244 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 GLIPR1L1Q6UWM5 242 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 UNQ9370/PRO34162Q6UXP9 181 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 FAM71E2Q8N5Q1 922 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 ZNF485Q8NCK3 441 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 RITA1Q96K30 269 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 PGLYRP3Q96LB9 341 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 PRR25Q96S07 402 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 GNG12Q9UBI6 72 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
TGFB3-204ENST00000556285 DIMT1Q9UNQ2 313 aaKnown RBP10.39□□□□□ -0.75
TGFB3-204ENST00000556285 LYSTQ99698 3801 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 TRBV5-7A0A0A0MS05 114 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 PNMA8CA0A1B0GUJ8 204 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 MCRIP1C9JLW8 97 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 BAG2O95816 211 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 VAMP1P23763 118 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-204ENST00000556285 ZNF137PP52743 207 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 GNMTQ14749 295 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 KIR2DS1Q14954 304 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 Q499Y3 187 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 SIGIRRQ6IA17 410 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 STX19Q8N4C7 294 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 JAGN1Q8N5M9 183 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 RNF152Q8N8N0 203 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 ZNF555Q8NEP9 628 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 OR14A2Q96R54 314 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 RASL11BQ9BPW5 248 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 PAK1IP1Q9NWT1 392 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-204ENST00000556285 SMPD3Q9NY59 655 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-204ENST00000556285 ETAA1Q9NY74 926 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 SCOCQ9UIL1 159 aa10.38□□□□□ -0.75
TGFB3-204ENST00000556285 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
TGFB3-204ENST00000556285 UBE2QL1A1L167 161 aa10.37□□□□□ -0.75
TGFB3-204ENST00000556285 SPINT2O43291 252 aa10.37□□□□□ -0.75
TGFB3-204ENST00000556285 ZNF780AO75290 641 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-204ENST00000556285 IGHG4P01861 327 aa10.37□□□□□ -0.75
TGFB3-204ENST00000556285 MAS1P04201 325 aa10.37□□□□□ -0.75
TGFB3-204ENST00000556285 ELANEP08246 267 aa10.37□□□□□ -0.75
TGFB3-204ENST00000556285 SLC2A2P11168 524 aaPredicted RBP10.37□□□□□ -0.75
TGFB3-204ENST00000556285 MYF6P23409 242 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms