RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TSPAN9O75954 239 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 RANBP1P43487 201 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 C2orf76Q3KRA6 126 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 TMEM219Q86XT9 240 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 PRR18Q8N4B5 295 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 MRPL30Q8TCC3 161 aaKnown RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 RPEQ96AT9 228 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 C16orf95Q9H693 158 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 TXNL4BQ9NX01 149 aaKnown RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 AMMECR1Q9Y4X0 333 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-217ENST00000556203 RNF114Q9Y508 228 aa12.23□□□□□ -0.45
ACTN1-217ENST00000556203 ANK2Q01484 3957 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 IGHV3-43A0A0B4J1X8 118 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 A0A1W2PPE3 182 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 IFITM5A6NNB3 132 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 SOCS1O15524 211 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 SPINT2O43291 252 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 IGHV3-43DP0DP04 118 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 RAB3BP20337 219 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 FGF9P31371 208 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-217ENST00000556203 ARHGDIBP52566 201 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 LOXL3P58215 753 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 TRAT1Q6PIZ9 186 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 OR52M1Q8NGK5 317 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 OR1L1Q8NH94 360 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 NPFFR1Q9GZQ6 430 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
ACTN1-217ENST00000556203 PLEKHJ1Q9NW61 149 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 FBLN5Q9UBX5 448 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 PITPNC1Q9UKF7 332 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 SSR3Q9UNL2 185 aa12.22□□□□□ -0.45
ACTN1-217ENST00000556203 TMEM272A0A1B0GTI8 110 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 SMIM30A4D0T7 59 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 LDLRAD4O15165 306 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
ACTN1-217ENST00000556203 HBZP02008 142 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 CD24P25063 80 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 BRS3P32247 399 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 PLA2G7Q13093 441 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 MADCAM1Q13477 382 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 FAM89BQ8N5H3 189 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 TOMM40LQ969M1 308 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 OR51E2Q9H255 320 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 CHMP1AQ9HD42 196 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-217ENST00000556203 GNG12Q9UBI6 72 aa12.21□□□□□ -0.45
ACTN1-217ENST00000556203 A0A0B4J203 849 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 TNFAIP8O95379 198 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 CD36P16671 472 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 MNDAP41218 407 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 VEGFCP49767 419 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 PROK1P58294 105 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 SRSF4Q08170 494 aaKnown RBP12.2□□□□□ -0.46
ACTN1-217ENST00000556203 DIAPH2-AS1Q14236 149 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 TSPAN14Q8NG11 270 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 OR10V1Q8NGI7 309 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 CHCHD6Q9BRQ6 235 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 RANBP3Q9H6Z4 567 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-217ENST00000556203 LIN7BQ9HAP6 207 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 RAB22AQ9UL26 194 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 SIGLEC9Q9Y336 463 aa12.2□□□□□ -0.46
ACTN1-217ENST00000556203 A0A087WXM4 84 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 LOC100506127A0A0U1RQW1 187 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 FOXI3A8MTJ6 420 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-217ENST00000556203 GADD45AP24522 165 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 KIR2DS4P43632 304 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 Q6ZTK2 550 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 C5orf24Q7Z6I8 188 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF554Q86TJ5 538 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 C8orf31Q8N9H6 132 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 ARHGAP5-AS1Q96IT6 56 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 AK3Q9UIJ7 227 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 HSF4Q9ULV5 492 aa12.19□□□□□ -0.46
ACTN1-217ENST00000556203 A0A1W2PPI3 338 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 NOTOA8MTQ0 251 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 TIMM23O14925 209 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 SLC31A2O15432 143 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 NAPSAO96009 420 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-217ENST00000556203 EFNB2P52799 333 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 TMEM50BP56557 158 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 KRTAP10-3P60369 221 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms