RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 MED20Q9H944 212 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 EFCAB1Q9HAE3 211 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 PLSCR3Q9NRY6 295 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 INTS9Q9NV88 658 aaKnown RBP3.69□□□□□ -1.82
ATXN3-232ENST00000555381 OR6C3Q9NZP0 311 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 ACTR3BQ9P1U1 418 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-232ENST00000555381 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
ATXN3-232ENST00000555381 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 U3KQV3 271 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 V9GYS6 101 aa3.69□□□□□ -1.82
ATXN3-232ENST00000555381 V9GYY5 206 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-232ENST00000555381 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 RYR1P21817 5038 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 IGKV1-27A0A075B6S5 117 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 IGHV1-3A0A0C4DH29 117 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TRBV2A0A0J9YWF9 115 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 A0A1B0GTI1 187 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 FAM90A10PA6NDY2 464 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 A6NIN4 97 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 H0Y980 276 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 SIRPB1O00241 398 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ENTPD6O75354 484 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 CCNB2O95067 398 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 OR2H2O95918 312 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 MOSP00540 346 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 SERPINA3P01011 423 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 IGLV1-51P01701 117 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TTRP02766 147 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 SEMG1P04279 462 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 FABP3P05413 133 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 CSN2P05814 226 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 PRKACAP17612 351 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 C21orf33P30042 268 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 NPBWR2P48146 333 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 RIDAP52758 137 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 HCCSP53701 268 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ATP1B3P54709 279 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 LINC00205P59089 165 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ACTR3P61158 418 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 PITPNAQ00169 270 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 MFGE8Q08431 387 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 BNIP1Q12981 228 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 UBE2V2Q15819 145 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 KRBOX4Q5JUW0 171 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 SLC35D3Q5M8T2 416 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 UTF1Q5T230 341 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 RNLSQ5VYX0 342 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 FAM53AQ6NSI3 398 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 C8orf82Q6P1X6 216 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 HACD2Q6Y1H2 254 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ZNF679Q8IYX0 411 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ELMOD2Q8IZ81 293 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 OR10A7Q8NGE5 316 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 OR9Q2Q8NGE9 314 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 OR10X1Q8NGY0 326 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ASB17Q8WXJ9 295 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 FLYWCH2Q96CP2 140 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 BORCS8Q96FH0 119 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 BTBD10Q9BSF8 475 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TMED9Q9BVK6 235 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 YIPF3Q9GZM5 350 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 NCOR1P1Q9H4R4 102 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 EXOSC4Q9NPD3 245 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 ARMC1Q9NVT9 282 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TAS2R1Q9NYW7 299 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 IDI2-AS1Q9NZ38 188 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 MSRB1Q9NZV6 116 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 MRM2Q9UI43 246 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 PSG11Q9UQ72 335 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 MRPS28Q9Y2Q9 187 aaKnown RBP3.68□□□□□ -1.82
ATXN3-232ENST00000555381 TMEM14AQ9Y6G1 99 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
ATXN3-232ENST00000555381 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 NPIPB11E5RHQ5 1161 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 HSD17B6O14756 317 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 DEGS1O15121 323 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 GATBO75879 557 aaKnown RBP3.67□□□□□ -1.82
ATXN3-232ENST00000555381 SOX14O95416 240 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 HSPB1P04792 205 aaKnown RBP3.67□□□□□ -1.82
ATXN3-232ENST00000555381 HMGN1P05114 100 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 CALCBP10092 127 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 COX4I1P13073 169 aa3.67□□□□□ -1.82
ATXN3-232ENST00000555381 BCL3P20749 454 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms