RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RLN2P04090 185 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 CTXN2P0C2S0 81 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 S100GP29377 79 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF83P51522 516 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 LUMP51884 338 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-216ENST00000554975 PRDX4Q13162 271 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 TAF9Q16594 264 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 CR1LQ2VPA4 569 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 RGS7BPQ6MZT1 257 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-216ENST00000554975 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 UNQ6126/PRO20091Q6UXV3 157 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 MOB1BQ7L9L4 216 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 FBXL14Q8N1E6 418 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 OR5A2Q8NGI9 324 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 OR51F2Q8NH61 342 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 C17orf50Q8WW18 174 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 GTF3AQ92664 365 aaKnown RBP9.39□□□□□ -0.91
SHMT2-216ENST00000554975 GALNT14Q96FL9 552 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 RTBDNQ9BSG5 229 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-216ENST00000554975 C1QTNF6Q9BXI9 259 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF442Q9H7R0 627 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 AK3Q9UIJ7 227 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 STARD10Q9Y365 291 aa9.39□□□□□ -0.91
SHMT2-216ENST00000554975 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 IGHV4-61A0A0C4DH41 118 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 LRP5LA4QPB2 252 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 VWC2LB2RUY7 222 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 F8VVB4 439 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 F8VWA3 439 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 TRAPPC2LH3BP13 241 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 M0R1B8 84 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 ABCD4O14678 606 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 DIRAS3O95661 229 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 RPS2P15880 293 aaKnown RBP9.38□□□□□ -0.91
SHMT2-216ENST00000554975 HNF1AP20823 631 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 SUPT4H1P63272 117 aaKnown RBP9.38□□□□□ -0.91
SHMT2-216ENST00000554975 ATXN7L3Q14CW9 347 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-216ENST00000554975 GABRA6Q16445 453 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 TBC1D28Q2M2D7 210 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 CEACAM21Q3KPI0 293 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 PAN3Q58A45 887 aaKnown RBP9.38□□□□□ -0.91
SHMT2-216ENST00000554975 SSX8Q7RTT4 187 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF573Q86YE8 665 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 Q8IYB0 196 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 STPG2Q8N412 459 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 POC1AQ8NBT0 407 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 OR10AD1Q8NGE0 317 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 SPIN2AQ99865 258 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 SPIN2BQ9BPZ2 258 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 PKIBQ9C010 78 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 NAA60Q9H7X0 242 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 CBLN4Q9NTU7 201 aa9.38□□□□□ -0.91
SHMT2-216ENST00000554975 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 C5orf49A4QMS7 147 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SDCBPO00560 298 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 OR7C1O76099 320 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 PLATP00750 562 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 TGFAP01135 160 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 FGF2P09038 288 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 CD79AP11912 226 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SELEP16581 610 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 RAB1AP62820 205 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 GNG3P63215 75 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SLC22A25Q6T423 547 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 DHRS11Q6UWP2 260 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 TMEM108Q6UXF1 575 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SLC25A26Q70HW3 274 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 LGI3Q8N145 548 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SLC30A7Q8NEW0 376 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 OR1K1Q8NGR3 316 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 OR1S1Q8NH92 325 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SGMS2Q8NHU3 365 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 ABHD14BQ96IU4 210 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 POM121L2Q96KW2 1035 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 SULT4A1Q9BR01 284 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 PLEKHA2Q9HB19 425 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 RCC2Q9P258 522 aaKnown RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF230Q9UIE0 474 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-216ENST00000554975 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
SHMT2-216ENST00000554975 RAB19A4D1S5 217 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 A8MXK9 166 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 GEMIN2O14893 280 aaKnown RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 KNG1P01042 644 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 GAPDHP04406 335 aaKnown RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 PATE4P0C8F1 98 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 TUBG1P23258 451 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 RND3P61587 244 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms