RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C1RLQ9NZP8 487 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 FBLN5Q9UBX5 448 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 VPREB3Q9UKI3 123 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 PSG11Q9UQ72 335 aa9.97□□□□□ -0.81
SYNE2-214ENST00000554928 TBL2Q9Y4P3 447 aaKnown RBP9.97□□□□□ -0.81
SYNE2-214ENST00000554928 LY6LH3BQJ8 138 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 SLC31A2O15432 143 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 CHST1O43916 411 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 GLAP06280 429 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 SNRPBP14678 240 aaKnown RBP9.96□□□□□ -0.82
SYNE2-214ENST00000554928 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-214ENST00000554928 CD24P25063 80 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 LOXL3P58215 753 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 LSM3P62310 102 aaKnown RBP9.96□□□□□ -0.82
SYNE2-214ENST00000554928 RBM39Q14498 530 aaKnown RBP9.96□□□□□ -0.82
SYNE2-214ENST00000554928 GNMTQ14749 295 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 HLA-DRB5Q30154 266 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 PRR18Q8N4B5 295 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 OR10V1Q8NGI7 309 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 NDNFQ8TB73 568 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 ARHGAP5-AS1Q96IT6 56 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 DPAGT1Q9H3H5 408 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 AK3Q9UIJ7 227 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 KCNK7Q9Y2U2 307 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 TENM1Q9UKZ4 2725 aa9.96□□□□□ -0.82
SYNE2-214ENST00000554928 NOTOA8MTQ0 251 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 J3QR06 171 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 F2RL2O00254 374 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 HBZP02008 142 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 GZMHP20718 246 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 HTR1DP28221 377 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 PSMD7P51665 324 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 OR52W1Q6IF63 320 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 SFXN4Q6P4A7 337 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 MALSU1Q96EH3 234 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 KCTD7Q96MP8 289 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 URM1Q9BTM9 101 aaKnown RBP9.95□□□□□ -0.82
SYNE2-214ENST00000554928 PECRQ9BY49 303 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
SYNE2-214ENST00000554928 GFOD1Q9NXC2 390 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 DAPK2Q9UIK4 370 aa9.95□□□□□ -0.82
SYNE2-214ENST00000554928 ELF5Q9UKW6 265 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-214ENST00000554928 VGLL3A8MV65 326 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 BUB1B-PAK6H3BSN5 160 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 SDCBPO00560 298 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-214ENST00000554928 ORC5O43913 435 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 NAPSAO96009 420 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 COMPP49747 757 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-214ENST00000554928 ZNF134P52741 427 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 TPTE2P1Q5T6R2 138 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 MINOS1Q5TGZ0 78 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 ZNF880Q6PDB4 577 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 Q6ZSV7 163 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 ZNF439Q8NDP4 499 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 OR52L2PQ8NGH6 319 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 OR5H6Q8NGV6 325 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 OR9G1Q8NH87 305 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 LGALS14Q8TCE9 139 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
SYNE2-214ENST00000554928 MMP28Q9H239 520 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 PLEKHJ1Q9NW61 149 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 RAB22AQ9UL26 194 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 MINOS1-NBL1R4GNA1 71 aa9.94□□□□□ -0.82
SYNE2-214ENST00000554928 A6NDX4 124 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 RAB27BO00194 218 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 TOR1AO14656 332 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 AIREO43918 545 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 CA11O75493 328 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 RAG2P55895 527 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 SRSF4Q08170 494 aaKnown RBP9.93□□□□□ -0.82
SYNE2-214ENST00000554928 HMGN3Q15651 99 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 C6orf183Q5T699 404 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 C12orf54Q6X4T0 127 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 Q6ZTK2 550 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 TPRA1Q86W33 373 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 OR10A7Q8NGE5 316 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 OR13F1Q8NGS4 319 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 OR5R1Q8NH85 324 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 SETD6Q8TBK2 473 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 ZNF596Q8TC21 504 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 FUNDC2Q9BWH2 189 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 PARP12Q9H0J9 701 aaKnown RBP9.93□□□□□ -0.82
SYNE2-214ENST00000554928 TCF19Q9Y242 345 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 SIGLEC9Q9Y336 463 aa9.93□□□□□ -0.82
SYNE2-214ENST00000554928 A0A075B6Q4 140 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 BTBD17A6NE02 478 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 LEUTXA8MZ59 168 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 GNB3P16520 340 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 PPP1CCP36873 323 aaKnown RBP9.92□□□□□ -0.82
SYNE2-214ENST00000554928 RPS19P39019 145 aaKnown RBP9.92□□□□□ -0.82
SYNE2-214ENST00000554928 REG1BP48304 166 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 PRRX1P54821 245 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 NCS1P62166 190 aa9.92□□□□□ -0.82
SYNE2-214ENST00000554928 AANATQ16613 207 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms