RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 RNF138Q8WVD3 245 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 OR2J1Q9GZK6 312 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF286AQ9HBT8 521 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 TGIF2-C20orf24A0A0A6YYL0 155 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 VSTM5A8MXK1 200 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 FCGR2CP31995 323 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 GABRA2P47869 451 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 PPP1CBP62140 327 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 IQCJQ1A5X6 159 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 TMEM18Q96B42 140 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 SEBOXQ9HB31 216 aaPredicted RBP14.29□□□□□ -0.12
PCNX1-209ENST00000554879 LAMP3Q9UQV4 416 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 G3V3Q6 166 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 SYNGR3O43761 229 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ADAP1O75689 374 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 FAM87AP0C7U9 286 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF133P52736 654 aaPredicted RBP14.29□□□□□ -0.12
PCNX1-209ENST00000554879 TMEM41BQ5BJD5 291 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 C1QL2Q7Z5L3 287 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 UBALD1Q8TB05 177 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ADGRG7Q96K78 797 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 RTL8AQ9BWD3 113 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 PAM16Q9Y3D7 125 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 PIGYQ3MUY2 71 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ZSCAN4Q8NAM6 433 aaPredicted RBP14.29□□□□□ -0.12
PCNX1-209ENST00000554879 GLRX2Q9NS18 164 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF391Q9UJN7 358 aa14.29□□□□□ -0.12
PCNX1-209ENST00000554879 SIRPB1O00241 398 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 DLEU1O43261 78 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 GSTZ1O43708 216 aaPredicted RBP14.28□□□□□ -0.12
PCNX1-209ENST00000554879 GSTP1P09211 210 aaKnown RBP14.28□□□□□ -0.12
PCNX1-209ENST00000554879 LTC4SQ16873 150 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 IAH1Q2TAA2 248 aaPredicted RBP14.28□□□□□ -0.12
PCNX1-209ENST00000554879 MEX3BQ6ZN04 569 aaKnown RBP14.28□□□□□ -0.12
PCNX1-209ENST00000554879 C1QL1O75973 258 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 NBL1P41271 181 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 GTF3C1Q12789 2109 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 CTDSPLO15194 276 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 C1orf100Q5SVJ3 147 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 RNF144BQ7Z419 303 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 SLC35B3Q9H1N7 401 aa14.28□□□□□ -0.12
PCNX1-209ENST00000554879 ANKRD11Q6UB99 2663 aaPredicted RBP14.28□□□□□ -0.12
PCNX1-209ENST00000554879 GNRHRP30968 328 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 ADIRFQ15847 76 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 PHLDA2Q53GA4 152 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF573Q86YE8 665 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 OR1K1Q8NGR3 316 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 WBP1Q96G27 269 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 SLC5A7Q9GZV3 580 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 CHD8Q9HCK8 2581 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 TRGC1P0CF51 173 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 AGAP20933 346 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 CLEC2AQ6UVW9 174 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 ZNF488Q96MN9 340 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 TRAPPC2LQ9UL33 140 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 USP34Q70CQ2 3546 aa14.27□□□□□ -0.12
PCNX1-209ENST00000554879 ZFP92A6NM28 416 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 RPL23AP62750 156 aaKnown RBP14.27□□□□□ -0.13
PCNX1-209ENST00000554879 OR10J5Q8NHC4 309 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 TMEM45BQ96B21 275 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF2Q9BSG1 426 aaPredicted RBP14.27□□□□□ -0.13
PCNX1-209ENST00000554879 HDHD3Q9BSH5 251 aaPredicted RBP14.27□□□□□ -0.13
PCNX1-209ENST00000554879 DEGS1O15121 323 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 FAM3AP98173 230 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 PAX5Q02548 391 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 C9orf106Q8NAJ2 232 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF596Q8TC21 504 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 LPAR5Q9H1C0 372 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 MSL2Q9HCI7 577 aa14.27□□□□□ -0.13
PCNX1-209ENST00000554879 RAB27BO00194 218 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 GNG3P63215 75 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 HIST3H3Q16695 136 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 SGPP2Q8IWX5 399 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 TMEM229BQ8NBD8 167 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 SLC25A40Q8TBP6 338 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 NINJ1Q92982 152 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 LYZL4Q96KX0 146 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 UBE2J1Q9Y385 318 aaPredicted RBP14.26□□□□□ -0.13
PCNX1-209ENST00000554879 ELOA3CA0A087WX78 387 aaPredicted RBP14.26□□□□□ -0.13
PCNX1-209ENST00000554879 LYG2Q86SG7 212 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 ZNF429Q86V71 674 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 TRAV14DV4A0A0A6YYC5 116 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 A0A1W2PPQ1 181 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 PPP5D1E7EU14 171 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 DLL1O00548 723 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 RPL12P30050 165 aaKnown RBP14.26□□□□□ -0.13
PCNX1-209ENST00000554879 GPX8Q8TED1 209 aa14.26□□□□□ -0.13
PCNX1-209ENST00000554879 TK1P04183 234 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 UNC119Q13432 240 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 HERPUD1Q15011 391 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 PNRC2Q9NPJ4 139 aaKnown RBP14.25□□□□□ -0.13
PCNX1-209ENST00000554879 AHRRA9YTQ3 701 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 EDDM3AQ14507 147 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 BHLHA15Q7RTS1 189 aaPredicted RBP14.25□□□□□ -0.13
PCNX1-209ENST00000554879 DEFB108BQ8NET1 73 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 TP53RKQ96S44 253 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 SOD3P08294 240 aa14.25□□□□□ -0.13
PCNX1-209ENST00000554879 IGFBP3P17936 291 aaPredicted RBP14.25□□□□□ -0.13
PCNX1-209ENST00000554879 RAB32Q13637 225 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms