RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CCDC107Q8WV48 283 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 ARL11Q969Q4 196 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 CREB3L1Q96BA8 519 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 MALSU1Q96EH3 234 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 CYYR1Q96J86 154 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 FAAP24Q9BTP7 215 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 FUNDC2Q9BWH2 189 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 CHIAQ9BZP6 476 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 MMP28Q9H239 520 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 C12orf4Q9NQ89 552 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 DAPK2Q9UIK4 370 aa9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 AMMECR1Q9Y4X0 333 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-209ENST00000552896 TRBV6-6A0A0A6YYG2 114 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 SDCBPO00560 298 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 TOR1AO14656 332 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 EFNB2P52799 333 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 HMGN3Q15651 99 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 Q3ZCU0 254 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 C16orf87Q6PH81 154 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 RFESDQ8TAC1 157 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 ARHGAP5-AS1Q96IT6 56 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 PECRQ9BY49 303 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 RIMS4Q9H426 269 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 KCNIP1Q9NZI2 227 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 AK3Q9UIJ7 227 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 ETV7Q9Y603 341 aa9.48□□□□□ -0.89
TRAFD1-209ENST00000552896 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 METTL21EPA6NDL7 271 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 H3BUX3 64 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 J3QR06 171 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 RAB27BO00194 218 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 GPR137BO60478 399 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 SCGNO76038 276 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 HBZP02008 142 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 CLEC2LP0C7M8 214 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 RCC1P18754 421 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 CEACAM3P40198 252 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 DYNLT3P51808 116 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 ARHGDIBP52566 201 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 PRRX1P54821 245 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 TMEM50BP56557 158 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 LOXL3P58215 753 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 LTC4SQ16873 150 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 PLAC9Q5JTB6 97 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 UTF1Q5T230 341 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 ZNF880Q6PDB4 577 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 LIAT1Q6ZQX7 453 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 Q6ZTK2 550 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 DYNAPQ8N1N2 210 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 OR10R2Q8NGX6 335 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 RAB3CQ96E17 227 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 SSX3Q99909 188 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 TAF9BQ9HBM6 251 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 CHMP1AQ9HD42 196 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 TNFRSF19Q9NS68 423 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 JPT1Q9UK76 154 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 MGAT4AQ9UM21 535 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 PSG11Q9UQ72 335 aa9.47□□□□□ -0.89
TRAFD1-209ENST00000552896 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 SERPINE3A8MV23 424 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 LEUTXA8MZ59 168 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 OOSP1A8MZH6 123 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 BUB1B-PAK6H3BSN5 160 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 MFNGO00587 321 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 LCE2BO14633 110 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 GABARAPO95166 117 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 HKR1P10072 659 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 TGFBR1P36897 503 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 ALDH3B2P48448 385 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 COMPP49747 757 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 GNG10P50151 68 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 LSM3P62310 102 aaKnown RBP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 ARL6IP1Q15041 203 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 SSX2Q16385 188 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 MOGAT2Q3SYC2 334 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 IDNKQ5T6J7 187 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 TPTE2P1Q5T6R2 138 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 CCDC144NLQ6NUI1 221 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 Q6ZPA2 131 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 PRR18Q8N4B5 295 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 LINC00311Q8N616 119 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 OR1L1Q8NH94 360 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 UBALD1Q8TB05 177 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 GCDHQ92947 438 aaPredicted RBP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 LEAP2Q969E1 77 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 ABCB10Q9NRK6 738 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 RHBDL2Q9NX52 303 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 ABRACLQ9P1F3 81 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 GNG12Q9UBI6 72 aa9.46□□□□□ -0.9
TRAFD1-209ENST00000552896 HILPDAQ9Y5L2 63 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms