RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 IGHV3-7P01780 117 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 VEGFCP49767 419 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 TMEM30BQ3MIR4 351 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 LDLRAD2Q5SZI1 272 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 SLC16A12Q6ZSM3 486 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 GAPTQ8N292 157 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 OR52M1Q8NGK5 317 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 MRPL30Q8TCC3 161 aaKnown RBP14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 LEAP2Q969E1 77 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 FAAP24Q9BTP7 215 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 LIN7BQ9HAP6 207 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 C1RLQ9NZP8 487 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 GNG12Q9UBI6 72 aa14.94□□□□□ -0.02
PRPF40B-216ENST00000552301 A0A0A6YYD4 124 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 A0A1B0GUS0 222 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 C15orf65H3BRN8 121 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 J3QR06 171 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 SOCS1O15524 211 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 NDUFA7O95182 113 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 CFPP27918 469 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 CCDC144NLQ6NUI1 221 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 LIAT1Q6ZQX7 453 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 ZNF554Q86TJ5 538 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 OR10X1Q8NGY0 326 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 TAF15Q92804 592 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 RPEQ96AT9 228 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 BEX1Q9HBH7 125 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 GFOD1Q9NXC2 390 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 PITPNC1Q9UKF7 332 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 PSG11Q9UQ72 335 aa14.93□□□□□ -0.02
PRPF40B-216ENST00000552301 BUB1B-PAK6H3BSN5 160 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 HBZP02008 142 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 RCC1P18754 421 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 BRS3P32247 399 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 MNDAP41218 407 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 TPTE2P1Q5T6R2 138 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 MOB1BQ7L9L4 216 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 FAM89BQ8N5H3 189 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 SETD6Q8TBK2 473 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 TOMM40LQ969M1 308 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 RIMS4Q9H426 269 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 TAF9BQ9HBM6 251 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 ABRACLQ9P1F3 81 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 TCF19Q9Y242 345 aa14.92□□□□□ -0.02
PRPF40B-216ENST00000552301 IGHV3-43A0A0B4J1X8 118 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 A0A0B4J203 849 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 METTL21EPA6NDL7 271 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 OOSP1A8MZH6 123 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 LDLRAD4O15165 306 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 IGHV3-43DP0DP04 118 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 RAB6AP20340 208 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 MDKP21741 143 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 IL3RAP26951 378 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 SDC2P34741 201 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 DYNLT3P51808 116 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 MRPS15P82914 257 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 MXD1Q05195 221 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 MADCAM1Q13477 382 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 UTF1Q5T230 341 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 Q6ZTK2 550 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 OR1L1Q8NH94 360 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 MBNL3Q9NUK0 354 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 DAPK2Q9UIK4 370 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 HSF4Q9ULV5 492 aa14.91□□□□□ -0.02
PRPF40B-216ENST00000552301 POM121CA8CG34 1229 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 AIREO43918 545 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 SLC2A2P11168 524 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 RAB13P51153 203 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 RELBQ01201 579 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 Q3ZCU0 254 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 SFXN4Q6P4A7 337 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 NR2C2APQ86WQ0 139 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 OR10V1Q8NGI7 309 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 OR4C13Q8NGP0 309 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 RAB3CQ96E17 227 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 ARHGAP5-AS1Q96IT6 56 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 CYYR1Q96J86 154 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 CENPOQ9BU64 300 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 NPFFR1Q9GZQ6 430 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 C12orf4Q9NQ89 552 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 OR2S2Q9NQN1 319 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 AK3Q9UIJ7 227 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 MMP24Q9Y5R2 645 aa14.9□□□□□ -0.02
PRPF40B-216ENST00000552301 A0A1W2PPE3 182 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 CLPSL1A2RUU4 121 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 JUNBP17275 347 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 LOXL3P58215 753 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 PIFOQ8TCI5 191 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 CAPSLQ8WWF8 208 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 GALMQ96C23 342 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 CMSS1Q9BQ75 279 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 PECRQ9BY49 303 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 RNF167Q9H6Y7 350 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 MGAT4AQ9UM21 535 aa14.89□□□□□ -0.03
PRPF40B-216ENST00000552301 FOXI3A8MTJ6 420 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 NAPSAO96009 420 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 CD3GP09693 182 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 RAB7AP51149 207 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 EFNB2P52799 333 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 PLA2G7Q13093 441 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms