RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GHITMQ9H3K2 345 aa11.02□□□□□ -0.65
CHMP1A-210ENST00000551981 IGHV3-43A0A0B4J1X8 118 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 SNTNA6NMZ2 147 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 IGHV3-43DP0DP04 118 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 SLC2A2P11168 524 aaPredicted RBP11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 FCGR1AP12314 374 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 MYF6P23409 242 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 PPIFP30405 207 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF137PP52743 207 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 GNB1P62873 340 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 MRPL28Q13084 256 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 GALEQ14376 348 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 MMDQ15546 238 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 TMEM30BQ3MIR4 351 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 NHLRC3Q5JS37 347 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 SLC25A48Q6ZT89 311 aaKnown RBP11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 STX19Q8N4C7 294 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 OR52N1Q8NH53 320 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 OR5AK2Q8NH90 309 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 UBALD1Q8TB05 177 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 NEK7Q8TDX7 302 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 CCDC107Q8WV48 283 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 ISOC1Q96CN7 298 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 S100A13Q99584 98 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 METTL9Q9H1A3 318 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 GNG12Q9UBI6 72 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 WSB1Q9Y6I7 421 aa11.01□□□□□ -0.65
CHMP1A-210ENST00000551981 SPINT2O43291 252 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 IGLV1-40P01703 118 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 RAB9AP51151 201 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 RBM11P57052 281 aaKnown RBP11□□□□□ -0.65
CHMP1A-210ENST00000551981 KIAA0141Q14154 515 aaPredicted RBP11□□□□□ -0.65
CHMP1A-210ENST00000551981 SLC25A30Q5SVS4 291 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 ATAD3CQ5T2N8 411 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 ASCL4Q6XD76 172 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 SYS1Q8N2H4 156 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 ALG8Q9BVK2 526 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 PARP11Q9NR21 331 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 PAK1IP1Q9NWT1 392 aaPredicted RBP11□□□□□ -0.65
CHMP1A-210ENST00000551981 IL36GQ9NZH8 169 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 ING4Q9UNL4 249 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 AP4S1Q9Y587 144 aa11□□□□□ -0.65
CHMP1A-210ENST00000551981 HYDINQ4G0P3 5121 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 TRIM64CA6NLI5 447 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 LINC01619G3V211 115 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 G3V318 75 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 AIPO00170 330 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 GEMIN2O14893 280 aaKnown RBP10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 LDLRAD4O15165 306 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 SLC31A2O15432 143 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 CDRT1O95170 752 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 LSAMPQ13449 338 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 MPV17LQ2QL34 196 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 FAM53AQ6NSI3 398 aaPredicted RBP10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF529Q6P280 563 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF497Q6ZNH5 498 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 OR51A2Q8NGJ7 313 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 PDCD1LG2Q9BQ51 273 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 TM2D3Q9BRN9 247 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF581Q9P0T4 197 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 ERGIC3Q9Y282 383 aa10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 EXOGQ9Y2C4 368 aaKnown RBP10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 MRPS28Q9Y2Q9 187 aaKnown RBP10.99□□□□□ -0.65
CHMP1A-210ENST00000551981 FAM90A10PA6NDY2 464 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 LANCL1O43813 399 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF780AO75290 641 aaPredicted RBP10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 HLA-DRB1P01911 266 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 MT-ND4P03905 459 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 CD2P06729 351 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 VHLP40337 213 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 GBX2P52951 348 aaPredicted RBP10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 C6orf183Q5T699 404 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 STEAP3Q658P3 488 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 LHFPL3Q86UP9 236 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF439Q8NDP4 499 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 OR10V1Q8NGI7 309 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 LGALS12Q96DT0 336 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF251Q9BRH9 671 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 JAM3Q9BX67 310 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 ISG20L2Q9H9L3 353 aaKnown RBP10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 SPACA1Q9HBV2 294 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 TAS2R4Q9NYW5 299 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 OAZ3Q9UMX2 235 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 ORC6Q9Y5N6 252 aa10.98□□□□□ -0.65
CHMP1A-210ENST00000551981 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
CHMP1A-210ENST00000551981 SERPINA2P20848 420 aa10.97□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF93P35789 620 aaPredicted RBP10.97□□□□□ -0.65
CHMP1A-210ENST00000551981 SOX2P48431 317 aa10.97□□□□□ -0.65
CHMP1A-210ENST00000551981 ZNF134P52741 427 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms