RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 DCKP27707 260 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 REG1BP48304 166 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 SOX2P48431 317 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 RIPK1Q13546 671 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 ZNF497Q6ZNH5 498 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
TPCN1-213ENST00000550543 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 OR10K1Q8NGX5 313 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 RHOXF1Q8NHV9 184 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 ST6GALNAC6Q969X2 333 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 C9orf16Q9BUW7 83 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 ISG20L2Q9H9L3 353 aaKnown RBP11.16□□□□□ -0.62
TPCN1-213ENST00000550543 TAS2R4Q9NYW5 299 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
TPCN1-213ENST00000550543 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 A0A1W2PPE3 182 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 FAM90A10PA6NDY2 464 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 FAM90A7PA6NKC0 464 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 FAM90A23PA8MXZ1 464 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 DYNC1I1O14576 645 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 GEMIN2O14893 280 aaKnown RBP11.15□□□□□ -0.62
TPCN1-213ENST00000550543 LANCL1O43813 399 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 RGS11O94810 467 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 CDRT1O95170 752 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 MT-ND4P03905 459 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 MYL12AP19105 171 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 SERPINA2P20848 420 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 PSMB8P28062 276 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.62
TPCN1-213ENST00000550543 RUNX1Q01196 453 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 FHL3Q13643 280 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 ZIK1Q3SY52 487 aaPredicted RBP11.15□□□□□ -0.62
TPCN1-213ENST00000550543 UTF1Q5T230 341 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 ZNF429Q86V71 674 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 CDH26Q8IXH8 852 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 FAM71E2Q8N5Q1 922 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 TMEM104Q8NE00 496 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 THRSPQ92748 146 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 UBE2E2Q96LR5 201 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 KCNIP1Q9NZI2 227 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
TPCN1-213ENST00000550543 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 LRRC42Q9Y546 428 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 SMAD5-AS1Q9Y6J3 95 aa11.15□□□□□ -0.62
TPCN1-213ENST00000550543 GABRB1P18505 474 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 CFHR3Q02985 330 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 MMDQ15546 238 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 PYDC1Q8WXC3 89 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 KCTD7Q96MP8 289 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 GHITMQ9H3K2 345 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
TPCN1-213ENST00000550543 E9PI62 339 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 ARPC1BO15143 372 aaKnown RBP11.13□□□□□ -0.63
TPCN1-213ENST00000550543 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 YIF1BQ5BJH7 314 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 CCDC107Q8WV48 283 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 DUX3Q96PT4 197 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 PRR25Q96S07 402 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 CST11Q9H112 138 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
TPCN1-213ENST00000550543 RCC2Q9P258 522 aaKnown RBP11.13□□□□□ -0.63
TPCN1-213ENST00000550543 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
TPCN1-213ENST00000550543 MRPS28Q9Y2Q9 187 aaKnown RBP11.13□□□□□ -0.63
TPCN1-213ENST00000550543 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 LOC100130705A0A1B0GUX0 176 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 GPX5O75715 221 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 LY86O95711 162 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 HLA-DRB1P01911 266 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 LSAMPQ13449 338 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
TPCN1-213ENST00000550543 ZNF555Q8NEP9 628 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 RDH12Q96NR8 316 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 ZNF184Q99676 751 aaPredicted RBP11.12□□□□□ -0.63
TPCN1-213ENST00000550543 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 AMBNQ9NP70 447 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 BABAM2Q9NXR7 383 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 JPT1Q9UK76 154 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 EXOSC1Q9Y3B2 195 aaKnown RBP11.12□□□□□ -0.63
TPCN1-213ENST00000550543 COL7A1Q02388 2944 aa11.12□□□□□ -0.63
TPCN1-213ENST00000550543 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
TPCN1-213ENST00000550543 HBZP02008 142 aa11.11□□□□□ -0.63
TPCN1-213ENST00000550543 LIMS3P0CW19 117 aa11.11□□□□□ -0.63
TPCN1-213ENST00000550543 LIMS4P0CW20 117 aa11.11□□□□□ -0.63
TPCN1-213ENST00000550543 FSTP19883 344 aa11.11□□□□□ -0.63
TPCN1-213ENST00000550543 FUT3P21217 361 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms