RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CORO2AQ92828 525 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 DERL3Q96Q80 235 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 PDCD1LG2Q9BQ51 273 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 FRRS1LQ9P0K9 344 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 ABRACLQ9P1F3 81 aa10.66□□□□□ -0.7
CDX2-202ENST00000548877 A0A1B0GTI1 187 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 PRR32B1ATL7 298 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 BUB1B-PAK6H3BSN5 160 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 J3QRK9 145 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 CTDSP2O14595 271 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 MGST3O14880 152 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 PSPNO60542 156 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 UPK1BO75841 260 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 CLEC2LP0C7M8 214 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 OCM2P0CE71 109 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 FAM106CPP0CH98 169 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 LYL1P12980 280 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 SRMP19623 302 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 TNFSF8P32971 234 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 TALDO1P37837 337 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 LUMP51884 338 aaPredicted RBP10.65□□□□□ -0.7
CDX2-202ENST00000548877 DEFA1P59665 94 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 DEFA3P59666 94 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.7
CDX2-202ENST00000548877 GRK1Q15835 563 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 HLA-DRB5Q30154 266 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 TMEM244Q5VVB8 128 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 SFXN4Q6P4A7 337 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 BAIAP2L2Q6UXY1 529 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 TPRX1Q8N7U7 411 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 OR5M8Q8NGP6 311 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 DIRAS2Q96HU8 199 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 CMTM3Q96MX0 182 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 RCHY1Q96PM5 261 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 OR14A2Q96R54 314 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 ZCCHC4Q9H5U6 513 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 TAS2R3Q9NYW6 316 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 CKLFQ9UBR5 152 aa10.65□□□□□ -0.7
CDX2-202ENST00000548877 FGF16O43320 207 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 HAND1O96004 215 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 IGHG2P01859 326 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 ISG15P05161 165 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 SNRNP70P08621 437 aaKnown RBP10.64□□□□□ -0.71
CDX2-202ENST00000548877 MNDAP41218 407 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 ECI1P42126 302 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 P2RX3P56373 397 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 SLC35B1P78383 322 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 INSL4Q14641 139 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 KIR2DS1Q14954 304 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 ZNF146Q15072 292 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 IDNKQ5T6J7 187 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 BCL2L15Q5TBC7 163 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 ELMOD2Q8IZ81 293 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 RNF152Q8N8N0 203 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 GDPD1Q8N9F7 314 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 TSEN15Q8WW01 171 aaKnown RBP10.64□□□□□ -0.71
CDX2-202ENST00000548877 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
CDX2-202ENST00000548877 NOL4LQ96MY1 436 aaPredicted RBP10.64□□□□□ -0.71
CDX2-202ENST00000548877 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 PCDHB16Q9NRJ7 776 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 COMMD3Q9UBI1 195 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 OR52A1Q9UKL2 312 aa10.64□□□□□ -0.71
CDX2-202ENST00000548877 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
CDX2-202ENST00000548877 TRBV5-7A0A0A0MS05 114 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 FABP12A6NFH5 140 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 CCL1P22362 96 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 CDK2P24941 298 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 CDX1P47902 265 aaPredicted RBP10.63□□□□□ -0.71
CDX2-202ENST00000548877 SCAND1P57086 179 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 MFGE8Q08431 387 aaPredicted RBP10.63□□□□□ -0.71
CDX2-202ENST00000548877 PRAMEF5Q5TYX0 476 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 LAX1Q8IWV1 398 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 Q8IYB0 196 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 PRSS35Q8N3Z0 413 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 OR8U1Q8NH10 309 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 DUX3Q96PT4 197 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 GTF2A1LQ9UNN4 478 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 DHDHQ9UQ10 334 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 SMAD5-AS1Q9Y6J3 95 aa10.63□□□□□ -0.71
CDX2-202ENST00000548877 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 TRGV10A0A0A0MS01 117 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 SHISA3A0PJX4 238 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 SERPINE3A8MV23 424 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 AIPO00170 330 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 GDNFP39905 211 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 KIR3DL2P43630 455 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 OR3A1P47881 315 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 PRRX1P54821 245 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 FAM27D1Q5T7N8 215 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 FAM131AQ6UXB0 335 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 SBSPONQ8IVN8 264 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 STPG2Q8N412 459 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 OR13C5Q8NGS8 318 aa10.62□□□□□ -0.71
CDX2-202ENST00000548877 SETD6Q8TBK2 473 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms