RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 MBNL3Q9NUK0 354 aaKnown RBP9.55□□□□□ -0.88
YBX3-217ENST00000546164 AMMECR1Q9Y4X0 333 aaPredicted RBP9.55□□□□□ -0.88
YBX3-217ENST00000546164 CMYA5Q8N3K9 4069 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 C12orf77C9JDV5 145 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 ARSBP15848 533 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 JUNBP17275 347 aaPredicted RBP9.54□□□□□ -0.88
YBX3-217ENST00000546164 BRS3P32247 399 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 LOXL3P58215 753 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 RAB11BQ15907 218 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 KCTD21Q4G0X4 260 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 SYT6Q5T7P8 510 aaPredicted RBP9.54□□□□□ -0.88
YBX3-217ENST00000546164 Q8N2B8 174 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 FAM89BQ8N5H3 189 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 LINC00311Q8N616 119 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 CCDC107Q8WV48 283 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 NEDD4LQ96PU5 975 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 CITED1Q99966 193 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 LPAR5Q9H1C0 372 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 GFOD1Q9NXC2 390 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 TRAPPC2LQ9UL33 140 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 V9GY05 133 aa9.54□□□□□ -0.88
YBX3-217ENST00000546164 A0A0A6YYD4 124 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 SHISA3A0PJX4 238 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 FOXI3A8MTJ6 420 aaPredicted RBP9.53□□□□□ -0.88
YBX3-217ENST00000546164 PDCD5O14737 125 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 LDLRAD4O15165 306 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 SPINT2O43291 252 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 RCC1P18754 421 aaPredicted RBP9.53□□□□□ -0.88
YBX3-217ENST00000546164 PSMB9P28065 219 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 FGF9P31371 208 aaPredicted RBP9.53□□□□□ -0.88
YBX3-217ENST00000546164 MNDAP41218 407 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 EFNB2P52799 333 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 KRTAP10-3P60369 221 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 MADCAM1Q13477 382 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 P2RY14Q15391 338 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 NKAPLQ5M9Q1 402 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 PRR31Q5SQ13 230 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 C16orf82Q7Z2V1 217 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 OR4K15Q8NH41 348 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 MRPL30Q8TCC3 161 aaKnown RBP9.53□□□□□ -0.88
YBX3-217ENST00000546164 FAM3DQ96BQ1 224 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 SULT4A1Q9BR01 284 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 NICN1Q9BSH3 213 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 URM1Q9BTM9 101 aaKnown RBP9.53□□□□□ -0.88
YBX3-217ENST00000546164 KCNK15Q9H427 330 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 ZNF696Q9H7X3 374 aa9.53□□□□□ -0.88
YBX3-217ENST00000546164 WNK1Q9H4A3 2382 aa9.52□□□□□ -0.88
YBX3-217ENST00000546164 VWFP04275 2813 aa9.52□□□□□ -0.88
YBX3-217ENST00000546164 UBE2QL1A1L167 161 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 SDCBPO00560 298 aaPredicted RBP9.52□□□□□ -0.89
YBX3-217ENST00000546164 NAPSAO96009 420 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 IGHV3-7P01780 117 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 HBZP02008 142 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 MYL9P24844 172 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 BLVRBP30043 206 aaPredicted RBP9.52□□□□□ -0.89
YBX3-217ENST00000546164 RAB7AP51149 207 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 LTC4SQ16873 150 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 STEAP3Q658P3 488 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 C6orf201Q7Z4U5 140 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 TMEM219Q86XT9 240 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 OR8H3Q8N146 312 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 OR51D1Q8NGF3 324 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 LEAP2Q969E1 77 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 TOMM40LQ969M1 308 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 RPEQ96AT9 228 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 CYYR1Q96J86 154 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 OCSTAMPQ9BR26 566 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 ZNF702PQ9H963 129 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 LIN7BQ9HAP6 207 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 TAF9BQ9HBM6 251 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 STEAP1Q9UHE8 339 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 HSF4Q9ULV5 492 aa9.52□□□□□ -0.89
YBX3-217ENST00000546164 A0A1W2PPI3 338 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 GNG10P50151 68 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 ZNF137PP52743 207 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 CLDN12P56749 244 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 OR10A3P58181 314 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 SRSF4Q08170 494 aaKnown RBP9.51□□□□□ -0.89
YBX3-217ENST00000546164 ZNF816Q0VGE8 651 aaPredicted RBP9.51□□□□□ -0.89
YBX3-217ENST00000546164 HABP2Q14520 560 aaPredicted RBP9.51□□□□□ -0.89
YBX3-217ENST00000546164 C2orf76Q3KRA6 126 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 C22orf42Q6IC83 251 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 ZNF880Q6PDB4 577 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 ZNF439Q8NDP4 499 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 OR10X1Q8NGY0 326 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 UBALD1Q8TB05 177 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 AKR1E2Q96JD6 320 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 FAAP24Q9BTP7 215 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 RIMS4Q9H426 269 aaPredicted RBP9.51□□□□□ -0.89
YBX3-217ENST00000546164 PLEKHJ1Q9NW61 149 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 KCNIP1Q9NZI2 227 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 STUB1Q9UNE7 303 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 SIGLEC9Q9Y336 463 aa9.51□□□□□ -0.89
YBX3-217ENST00000546164 TRBV6-6A0A0A6YYG2 114 aa9.5□□□□□ -0.89
YBX3-217ENST00000546164 TMEM272A0A1B0GTI8 110 aa9.5□□□□□ -0.89
YBX3-217ENST00000546164 SOCS1O15524 211 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms