RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RAB5CP51148 216 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 IL11RAQ14626 422 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 RAB35Q15286 201 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF383Q8NA42 475 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 FRZBQ92765 325 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 RARRES2Q99969 163 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 ATG101Q9BSB4 218 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 MRPL13Q9BYD1 178 aaKnown RBP8.46□□□□□ -1.06
TRAF1-203ENST00000546084 TOLLIPQ9H0E2 274 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 KCNIP1Q9NZI2 227 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 FOXJ2Q9P0K8 574 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 NOTCH2Q04721 2471 aa8.46□□□□□ -1.06
TRAF1-203ENST00000546084 PROB1E7EW31 1015 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 PPYP01298 95 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 MBPP02686 304 aaPredicted RBP8.45□□□□□ -1.06
TRAF1-203ENST00000546084 CD5P06127 495 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 BMI1P35226 326 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 ALDH3B1P43353 468 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 ARL6IP1Q15041 203 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 ADIRFQ15847 76 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 MPV17LQ2QL34 196 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 C10orf91Q5T1B1 145 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 TMEM204Q9BSN7 226 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 SLC35B3Q9H1N7 401 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF552Q9H707 407 aaPredicted RBP8.45□□□□□ -1.06
TRAF1-203ENST00000546084 PLEKHA2Q9HB19 425 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 VSTM5A8MXK1 200 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 PHOX2AO14813 284 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 PDCD6O75340 191 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 DEDDO75618 318 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 CD46P15529 392 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
TRAF1-203ENST00000546084 MEOX1P50221 254 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 HIST2H3PS2Q5TEC6 136 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 HIPK2Q9H2X6 1198 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 NAA60Q9H7X0 242 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 UCK1Q9HA47 277 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 OSGIN2Q9Y236 505 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 OTOGLQ3ZCN5 2332 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 TECTAO75443 2155 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 C3orf85A0A1B0GTC6 90 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 OR6C6A6NF89 314 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 K7ESF4 209 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 RHBDL1O75783 438 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 MPZP25189 248 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 SNCAP37840 140 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 HGFACQ04756 655 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 DEFB109BQ30KR1 87 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 C22orf15Q8WYQ4 148 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 OR2J1Q9GZK6 312 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 CACNG5Q9UF02 275 aa8.45□□□□□ -1.06
TRAF1-203ENST00000546084 NTF4P34130 210 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 FUT6P51993 359 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 MRPL49Q13405 166 aaKnown RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 CPEB3Q8NE35 698 aaKnown RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 DMBX1Q8NFW5 382 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 MRGPRDQ8TDS7 321 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 TP53RKQ96S44 253 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 RSG1Q9BU20 258 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 MMP9P14780 707 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 NKX6-1P78426 367 aaPredicted RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 ZP4Q12836 540 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 SRSF6Q13247 344 aaKnown RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 HES3Q5TGS1 186 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 LHFPL2Q6ZUX7 228 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 SSX7Q7RTT5 188 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 ZNF441Q8N8Z8 693 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 DEFB124Q8NES8 71 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 FAM131CQ96AQ9 280 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 GCM1Q9NP62 436 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 LOC400499M0QZD8 3231 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 ANKRD11Q6UB99 2663 aaPredicted RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 UBE2L5PA0A1B0GUS4 154 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 NKX2-8O15522 239 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 KLF7O75840 302 aaPredicted RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 DEFA4P12838 97 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 CEACAM6P40199 344 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 DYNLT3P51808 116 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 FAM3AP98173 230 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 BAXQ07812 192 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 NUFIP2Q7Z417 695 aaKnown RBP8.44□□□□□ -1.06
TRAF1-203ENST00000546084 WDR5BQ86VZ2 330 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 POMT1Q9Y6A1 747 aa8.44□□□□□ -1.06
TRAF1-203ENST00000546084 CFAP47Q6ZTR5 3102 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 IGKV1-27A0A075B6S5 117 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 IGKV1-12A0A0C4DH73 117 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 SLC22A20A6NK97 555 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 IGKV1D-12P01611 117 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
TRAF1-203ENST00000546084 PAX6P26367 422 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 GCH1P30793 250 aa8.43□□□□□ -1.06
TRAF1-203ENST00000546084 SRD5A2P31213 254 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms