RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 SDF2L1Q9HCN8 221 aa9.78□□□□□ -0.84
CDH4-201ENST00000543233 C1orf123Q9NWV4 160 aa9.78□□□□□ -0.84
CDH4-201ENST00000543233 MED29Q9NX70 200 aa9.78□□□□□ -0.84
CDH4-201ENST00000543233 DHDHQ9UQ10 334 aa9.78□□□□□ -0.84
CDH4-201ENST00000543233 MRPS17Q9Y2R5 130 aaKnown RBP9.78□□□□□ -0.84
CDH4-201ENST00000543233 TRBV5-5A0A0J9YX44 114 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 A0A0U1RQK1 487 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 OR5B21A6NL26 309 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 VSTM5A8MXK1 200 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 H2BFMP0C1H6 154 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 PGCP20142 388 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 GFRA1P56159 465 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 RUNX1Q01196 453 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 RBPJQ06330 500 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 DMRTC1Q5HYR2 192 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 FAM90A2PQ658T7 463 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 CPEB2Q7Z5Q1 589 aaKnown RBP9.77□□□□□ -0.85
CDH4-201ENST00000543233 LRRC75AQ8NAA5 344 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 CLDND2Q8NHS1 167 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 ABHD6Q9BV23 337 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 CENPMQ9NSP4 180 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 RYDENQ9NUL5 291 aaKnown RBP9.77□□□□□ -0.85
CDH4-201ENST00000543233 PHF3Q92576 2039 aaKnown RBP9.77□□□□□ -0.85
CDH4-201ENST00000543233 IGKV3D-11A0A0A0MRZ8 115 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 OR2T8A6NH00 312 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 C10orf142B7Z368 130 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 UPK3AO75631 287 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 ZNF20P17024 532 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 TAS2R30P59541 319 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 GGTLC2Q14390 218 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 LCN15Q6UWW0 184 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 OR5H2Q8NGV7 314 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 FGGYQ96C11 551 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 GPR132Q9UNW8 380 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 DOCK11Q5JSL3 2073 aa9.77□□□□□ -0.85
CDH4-201ENST00000543233 RALGAPA1Q6GYQ0 2036 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 NSG1A0A0A6YYJ2 146 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 LILRA1O75019 489 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TTRP02766 147 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 DNASE1L1P49184 302 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 CRYBA4P53673 196 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 FFAR4Q5NUL3 377 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 C1orf140Q5VVS0 124 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 BAGE2Q86Y30 109 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 PSMF1Q92530 271 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 ZC2HC1AQ96GY0 325 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 WNT10AQ9GZT5 417 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 COA3Q9Y2R0 106 aaPredicted RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 NUDT21O43809 227 aaKnown RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 CDS2O95674 445 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 FAHP16930 419 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 ARF6P62330 175 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 WDR38Q5JTN6 314 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TGIF2LYQ8IUE0 185 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 LIN37Q96GY3 246 aaPredicted RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 KLRF1Q9NZS2 232 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TRAV36DV7A0A075B6V5 113 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TMEM212A6NML5 194 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 HRASP01112 189 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 IGLC2P0DOY2 106 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 IGLC3P0DOY3 106 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 AMY2BP19961 511 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 RAB9AP51151 201 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 SELENOVP59797 346 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 SHBQ15464 509 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 PCK2Q16822 640 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 PHF19Q5T6S3 580 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 FBXW12Q6X9E4 464 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TMEM217Q8N7C4 229 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 OR4D6Q8NGJ1 314 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 OR51G1Q8NGK1 321 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 SARAFQ96BY9 339 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 ZNF501Q96CX3 271 aaPredicted RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 RBMXL1Q96E39 390 aaKnown RBP9.76□□□□□ -0.85
CDH4-201ENST00000543233 SCGB3A2Q96PL1 93 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 ZNF665Q9H7R5 613 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 ABI3Q9P2A4 366 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 PRSS50Q9UI38 385 aa9.76□□□□□ -0.85
CDH4-201ENST00000543233 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 ALG1L2C9J202 215 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 H3BMH7 237 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 SYNGR4O95473 234 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 BGLAPP02818 100 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CFIP05156 583 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CXCL12P48061 93 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 POU3F1Q03052 451 aaPredicted RBP9.75□□□□□ -0.85
CDH4-201ENST00000543233 ARFRP1Q13795 201 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 BSXQ3C1V8 233 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CDCP2Q5VXM1 449 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 C17orf82Q86X59 251 aaPredicted RBP9.75□□□□□ -0.85
CDH4-201ENST00000543233 RASL10BQ96S79 203 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 ST6GALNAC5Q9BVH7 336 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 B9D1Q9UPM9 204 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 FRYQ5TBA9 3013 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 TRBV5-7A0A0A0MS05 114 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms