RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CCR7P32248 378 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RPS9P46781 194 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GALR1P47211 349 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RBP2P50120 134 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 TDGF1P3P51864 188 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 CCL23P55773 120 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GABARAPL2P60520 117 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RPS23P62266 143 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GTF2BQ00403 316 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 KIAA0040Q15053 153 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 IRF4Q15306 451 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GUSBP1Q15486 140 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNHIT3Q15649 155 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 TOMM34Q15785 309 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 POU2AF1Q16633 256 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 IMPG1Q17R60 797 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 BSXQ3C1V8 233 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RBM48Q5RL73 367 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 LAMTOR1Q6IAA8 161 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 LCN8Q6JVE9 175 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM151BQ6UXP7 276 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF493Q6ZR52 646 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RNF165Q6ZSG1 346 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 COX15Q7KZN9 410 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 SSX7Q7RTT5 188 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PAGE2Q7Z2X7 111 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 DCXRQ7Z4W1 244 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM19A1Q7Z5A9 133 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 FUNDC1Q8IVP5 155 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 C8orf59Q8N0T1 100 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 STX19Q8N4C7 294 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF561Q8N587 486 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 C12orf45Q8N5I9 185 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 OR2L2Q8NH16 312 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 OR4S2Q8NH73 311 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MAFIPQ8WZ33 124 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RGP1Q92546 391 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RORBQ92753 470 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 LRRC58Q96CX6 371 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 SEH1LQ96EE3 360 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 GALNT14Q96FL9 552 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 C14orf144Q96I85 54 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 MCEEQ96PE7 176 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ATOH8Q96SQ7 321 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 EBNA1BP2Q99848 306 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 RASL11BQ9BPW5 248 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PDCD1LG2Q9BQ51 273 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 NRIP2Q9BQI9 281 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 DERL2Q9GZP9 239 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 CCDC90BQ9GZT6 254 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ASB8Q9H765 288 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 METTL8Q9H825 291 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 IMP3Q9NV31 184 aaKnown RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF107Q9UII5 783 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 HEBP2Q9Y5Z4 205 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ALG5Q9Y673 324 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 DOCK1Q14185 1865 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 OTOGLQ3ZCN5 2332 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 PTPRJQ12913 1337 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZZEF1O43149 2961 aa2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 USP9XQ93008 2570 aaPredicted RBP2.87□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF236Q9UL36 1845 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 PTPN13Q12923 2485 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 PLXNA1Q9UIW2 1896 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 COL4A4P53420 1690 aaPredicted RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MYO18BQ8IUG5 2567 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CNOT1A5YKK6 2376 aaKnown RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 HECTD1Q9ULT8 2610 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 IGHV2OR16-5A0A0B4J2B6 119 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM240AA0A1B0GVK7 77 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 TMEM150BA6NC51 233 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 E5RI56 91 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 APOC4-APOC2K7ER74 178 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 M0R1B8 84 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CHP2O43745 196 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MRPS14O60783 128 aaKnown RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MMP23AO75900 390 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 APOC2P02655 101 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 BGLAPP02818 100 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 RLN2P04090 185 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FABP3P05413 133 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 PET100P0DJ07 73 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC2A1P11166 492 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 HLA-EP13747 358 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 GABRR1P24046 479 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MT3P25713 68 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 MYCNOSP40205 109 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 OMPP47874 163 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CDC34P49427 236 aaPredicted RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ZNF138P52744 262 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 ARPP19P56211 112 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 RIPPLY3P57055 190 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CACNG7P62955 275 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC35A1P78382 337 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 CRADDP78560 199 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 SLC7A9P82251 487 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 EMX1Q04741 257 aaPredicted RBP2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 TTLL9Q3SXZ7 439 aa2.86□□□□□ -1.95
SFSWAP-211ENST00000542813 FAM45BPQ6NSW5 357 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms