RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 NKAPLQ5M9Q1 402 aa16.15■□□□□ 0.18
CACNA2D4-215ENST00000542340 CCDC144NLQ6NUI1 221 aa16.15■□□□□ 0.18
CACNA2D4-215ENST00000542340 URM1Q9BTM9 101 aaKnown RBP16.15■□□□□ 0.18
CACNA2D4-215ENST00000542340 KCNK15Q9H427 330 aa16.15■□□□□ 0.18
CACNA2D4-215ENST00000542340 C12orf77C9JDV5 145 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 SDCBPO00560 298 aaPredicted RBP16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 SPINT2O43291 252 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 MYL9P24844 172 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 LOXL3P58215 753 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 TMEM30BQ3MIR4 351 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 KCTD21Q4G0X4 260 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 ZNF554Q86TJ5 538 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 TMEM219Q86XT9 240 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 C8orf31Q8N9H6 132 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR51D1Q8NGF3 324 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 SULT4A1Q9BR01 284 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 NICN1Q9BSH3 213 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 LPAR5Q9H1C0 372 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 MBNL3Q9NUK0 354 aaKnown RBP16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 GFOD1Q9NXC2 390 aa16.14■□□□□ 0.17
CACNA2D4-215ENST00000542340 RCC1P18754 421 aaPredicted RBP16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 BLVRBP30043 206 aaPredicted RBP16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 MNDAP41218 407 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 GNG10P50151 68 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 MADCAM1Q13477 382 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 C2orf76Q3KRA6 126 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 Q3ZCU0 254 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 C11orf88Q6PI97 169 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 C6orf201Q7Z4U5 140 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 FAM89BQ8N5H3 189 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 MRPL30Q8TCC3 161 aaKnown RBP16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 RPEQ96AT9 228 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 FAM3DQ96BQ1 224 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 CITED1Q99966 193 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 FAAP24Q9BTP7 215 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 STEAP1Q9UHE8 339 aa16.13■□□□□ 0.17
CACNA2D4-215ENST00000542340 SHISA3A0PJX4 238 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 FGF9P31371 208 aaPredicted RBP16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 CLDN12P56749 244 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 C22orf42Q6IC83 251 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 LINC00311Q8N616 119 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR10X1Q8NGY0 326 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR2T6Q8NHC8 308 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 UBALD1Q8TB05 177 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 TOMM40LQ969M1 308 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 CYYR1Q96J86 154 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 PLEKHJ1Q9NW61 149 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 KCNIP1Q9NZI2 227 aa16.12■□□□□ 0.17
CACNA2D4-215ENST00000542340 A0A0A6YYD4 124 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 HBZP02008 142 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 EFNB2P52799 333 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 KRTAP10-3P60369 221 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 SRSF4Q08170 494 aaKnown RBP16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 HES5Q5TA89 166 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 C16orf82Q7Z2V1 217 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 Q8N2B8 174 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 OCSTAMPQ9BR26 566 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 ZNF696Q9H7X3 374 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 TAF9BQ9HBM6 251 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 STUB1Q9UNE7 303 aa16.11■□□□□ 0.17
CACNA2D4-215ENST00000542340 IGHV3-43A0A0B4J1X8 118 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 A0A1W2PPE3 182 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 IFITM5A6NNB3 132 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 LDLRAD4O15165 306 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 SOCS1O15524 211 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 IGHV3-43DP0DP04 118 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 RAB3BP20337 219 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 CD24P25063 80 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 RAB7AP51149 207 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR10A3P58181 314 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 PRR18Q8N4B5 295 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR1L1Q8NH94 360 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 PRSS22Q9GZN4 317 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 LIN7BQ9HAP6 207 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 TXNL4BQ9NX01 149 aaKnown RBP16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 GNG12Q9UBI6 72 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 HSF4Q9ULV5 492 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 SIGLEC9Q9Y336 463 aa16.1■□□□□ 0.17
CACNA2D4-215ENST00000542340 FAM90A9PA6NNJ1 464 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 FOXI3A8MTJ6 420 aaPredicted RBP16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 NAPSAO96009 420 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 PRR31Q5SQ13 230 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 FAM53AQ6NSI3 398 aaPredicted RBP16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 THNSL2Q86YJ6 484 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 OR8H3Q8N146 312 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 AKR1E2Q96JD6 320 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 RIMS4Q9H426 269 aaPredicted RBP16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 ZNF702PQ9H963 129 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 RAB22AQ9UL26 194 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 SSR3Q9UNL2 185 aa16.09■□□□□ 0.17
CACNA2D4-215ENST00000542340 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 TMEM272A0A1B0GTI8 110 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 A0A1W2PPI3 338 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 FAM106CPP0CH98 169 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 TMEM50BP56557 158 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 HTD2P86397 168 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 ZNF816Q0VGE8 651 aaPredicted RBP16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 DIAPH2-AS1Q14236 149 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 STEAP3Q658P3 488 aa16.08■□□□□ 0.16
CACNA2D4-215ENST00000542340 ZNF439Q8NDP4 499 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms