RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GALEQ14376 348 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 RSU1Q15404 277 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 PIGYQ3MUY2 71 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 SUMF2Q8NBJ7 301 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 ARL11Q969Q4 196 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 ISYNA1Q9NPH2 558 aa20.83■□□□□ 0.93
CHFR-218ENST00000540963 TRAV39A0A0B4J263 110 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 TMEM212A6NML5 194 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 GABRPO00591 440 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 FRMD6-AS1P0C7T7 363 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 ZNF529Q6P280 563 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 TNFAIP8L1Q8WVP5 186 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 GPER1Q99527 375 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 ALG8Q9BVK2 526 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 ERVK13-1Q9NX77 482 aa20.82■□□□□ 0.92
CHFR-218ENST00000540963 ZNF107Q9UII5 783 aaPredicted RBP20.82■□□□□ 0.92
CHFR-218ENST00000540963 DNAH1Q9P2D7 4330 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 OVOL1O14753 267 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 RAB3AP20336 220 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 F2RL1P55085 397 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 TMEM30BQ3MIR4 351 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 LINC00596Q86U02 117 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 GNB4Q9HAV0 340 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 MRPS18AQ9NVS2 196 aaKnown RBP20.81■□□□□ 0.92
CHFR-218ENST00000540963 DHDHQ9UQ10 334 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 ST3GAL6Q9Y274 331 aa20.81■□□□□ 0.92
CHFR-218ENST00000540963 ZNF736B4DX44 427 aaPredicted RBP20.8■□□□□ 0.92
CHFR-218ENST00000540963 IGLV1-40P01703 118 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 MRPL28Q13084 256 aaKnown RBP20.8■□□□□ 0.92
CHFR-218ENST00000540963 SLC25A48Q6ZT89 311 aaKnown RBP20.8■□□□□ 0.92
CHFR-218ENST00000540963 OVCH2Q7RTZ1 564 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 SYS1Q8N2H4 156 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 OR52I1Q8NGK6 324 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 KLK15Q9H2R5 256 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 OR51J1Q9H342 316 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 RAB9BQ9NP90 201 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 IL36GQ9NZH8 169 aa20.8■□□□□ 0.92
CHFR-218ENST00000540963 CSMD3Q7Z407 3707 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 LOC100130705A0A1B0GUX0 176 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 FAM90A10PA6NDY2 464 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 VHLP40337 213 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 SMN1Q16637 294 aaKnown RBP20.79■□□□□ 0.92
CHFR-218ENST00000540963 PQLC1Q8N2U9 271 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 RGP1Q92546 391 aaPredicted RBP20.79■□□□□ 0.92
CHFR-218ENST00000540963 DCUN1D4Q92564 292 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 C9orf16Q9BUW7 83 aa20.79■□□□□ 0.92
CHFR-218ENST00000540963 WBP4O75554 376 aaKnown RBP20.78■□□□□ 0.92
CHFR-218ENST00000540963 OR7C1O76099 320 aaPredicted RBP20.78■□□□□ 0.92
CHFR-218ENST00000540963 HTR3BO95264 441 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 LIMS3P0CW19 117 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 LIMS4P0CW20 117 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 GP9P14770 177 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 RBM11P57052 281 aaKnown RBP20.78■□□□□ 0.92
CHFR-218ENST00000540963 LPCAT4Q643R3 524 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 STEAP3Q658P3 488 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 SATL1Q86VE3 508 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 OR6Q1Q8NGQ2 317 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 OR10K1Q8NGX5 313 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 OR5AK2Q8NH90 309 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 PDCD1LG2Q9BQ51 273 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 FAM192AQ9GZU8 254 aa20.78■□□□□ 0.92
CHFR-218ENST00000540963 SNTNA6NMZ2 147 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 SAP30O75446 220 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 SPNP16150 400 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 GTF2A1P52655 376 aaPredicted RBP20.77■□□□□ 0.92
CHFR-218ENST00000540963 GNB1P62873 340 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 MPV17LQ2QL34 196 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 XAF1Q6GPH4 301 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 ZNF439Q8NDP4 499 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 OR52N1Q8NH53 320 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 TSEN15Q8WW01 171 aaKnown RBP20.77■□□□□ 0.92
CHFR-218ENST00000540963 TM2D3Q9BRN9 247 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 GHITMQ9H3K2 345 aa20.77■□□□□ 0.92
CHFR-218ENST00000540963 RAB9AP51151 201 aa20.76■□□□□ 0.91
CHFR-218ENST00000540963 RAB40BQ12829 278 aa20.76■□□□□ 0.91
CHFR-218ENST00000540963 ZNF497Q6ZNH5 498 aa20.76■□□□□ 0.91
CHFR-218ENST00000540963 METTL9Q9H1A3 318 aa20.76■□□□□ 0.91
CHFR-218ENST00000540963 PAK1IP1Q9NWT1 392 aaPredicted RBP20.76■□□□□ 0.91
CHFR-218ENST00000540963 LANCL1O43813 399 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 FADS2O95864 444 aaKnown RBP20.75■□□□□ 0.91
CHFR-218ENST00000540963 HLA-DRB1P01911 266 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 MT-ND4P03905 459 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 CSTBP04080 98 aaKnown RBP20.75■□□□□ 0.91
CHFR-218ENST00000540963 LSAMPQ13449 338 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 MMDQ15546 238 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 OR51A2Q8NGJ7 313 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 JAM3Q9BX67 310 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 GAR1Q9NY12 217 aaKnown RBP20.75■□□□□ 0.91
CHFR-218ENST00000540963 ZNF581Q9P0T4 197 aa20.75■□□□□ 0.91
CHFR-218ENST00000540963 STARD9Q9P2P6 4700 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 IGHV3-43A0A0B4J1X8 118 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 SLC31A2O15432 143 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 IGHV3-43DP0DP04 118 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 SLC2A2P11168 524 aaPredicted RBP20.74■□□□□ 0.91
CHFR-218ENST00000540963 STX19Q8N4C7 294 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 DLX4Q92988 240 aaPredicted RBP20.74■□□□□ 0.91
CHFR-218ENST00000540963 ISOC1Q96CN7 298 aa20.74■□□□□ 0.91
CHFR-218ENST00000540963 FGF20Q9NP95 211 aaPredicted RBP20.74■□□□□ 0.91
CHFR-218ENST00000540963 MRPS28Q9Y2Q9 187 aaKnown RBP20.74■□□□□ 0.91
CHFR-218ENST00000540963 WSB1Q9Y6I7 421 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms