RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 C6orf183Q5T699 404 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 NR2C2APQ86WQ0 139 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 OR10A7Q8NGE5 316 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 SULT4A1Q9BR01 284 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 CHCHD6Q9BRQ6 235 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 LPAR5Q9H1C0 372 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 MMP28Q9H239 520 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 PLEKHJ1Q9NW61 149 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 IGHV3-43A0A0B4J1X8 118 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 A0A0B4J203 849 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 TMEM272A0A1B0GTI8 110 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 A0A1W2PPE3 182 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 C12orf77C9JDV5 145 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 J3QR06 171 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 F2RL2O00254 374 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 CHST1O43916 411 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 HBZP02008 142 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 IGHV3-43DP0DP04 118 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 GADD45AP24522 165 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 PLA2G7Q13093 441 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-215ENST00000540904 TRAT1Q6PIZ9 186 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 GAPTQ8N292 157 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 FAM89BQ8N5H3 189 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 OR10X1Q8NGY0 326 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 OR1L1Q8NH94 360 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 CREB3L1Q96BA8 519 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 LIN7BQ9HAP6 207 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 BEX1Q9HBH7 125 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 TAF9BQ9HBM6 251 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 CHMP1AQ9HD42 196 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-215ENST00000540904 VCX3AQ9NNX9 186 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 RAB9BQ9NP90 201 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 KCNIP1Q9NZI2 227 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 GNG12Q9UBI6 72 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 FBLN5Q9UBX5 448 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 RAB22AQ9UL26 194 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 TCF19Q9Y242 345 aa7.44□□□□□ -1.22
SNHG1-215ENST00000540904 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-215ENST00000540904 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 A0A1B0GUS0 222 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 POM121CA8CG34 1229 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 LY6LH3BQJ8 138 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 LDLRAD4O15165 306 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 SLC2A2P11168 524 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-215ENST00000540904 CD24P25063 80 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 SDC2P34741 201 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 MNDAP41218 407 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 VEGFCP49767 419 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 DYNLT3P51808 116 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 ARHGDIBP52566 201 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 EFNB2P52799 333 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 LOXL3P58215 753 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 MADCAM1Q13477 382 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 TPTE2P1Q5T6R2 138 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 OLFML2AQ68BL7 652 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 CCBE1Q6UXH8 406 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-215ENST00000540904 SLC16A12Q6ZSM3 486 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 Q6ZSV7 163 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 C5orf24Q7Z6I8 188 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 TPRA1Q86W33 373 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 OR56B1Q8NGI3 324 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 OR10V1Q8NGI7 309 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 OR52M1Q8NGK5 317 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 LINC01006Q8NI28 216 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 SETD6Q8TBK2 473 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 MRPL30Q8TCC3 161 aaKnown RBP7.43□□□□□ -1.22
SNHG1-215ENST00000540904 TOMM40LQ969M1 308 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 RPEQ96AT9 228 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 ARHGAP5-AS1Q96IT6 56 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 KCTD7Q96MP8 289 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 CENPOQ9BU64 300 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 ZNF747Q9BV97 191 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 RNF167Q9H6Y7 350 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 ZNF696Q9H7X3 374 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 RAB18Q9NP72 206 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
SNHG1-215ENST00000540904 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 AK3Q9UIJ7 227 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 DAPK2Q9UIK4 370 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 PITPNC1Q9UKF7 332 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 MMP24Q9Y5R2 645 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 DSCAML1Q8TD84 2053 aa7.43□□□□□ -1.22
SNHG1-215ENST00000540904 KIAA2026Q5HYC2 2103 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 CLPSL1A2RUU4 121 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 A6NDX4 124 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 FOXI3A8MTJ6 420 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-215ENST00000540904 NOTOA8MTQ0 251 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 ST8SIA5O15466 376 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 NAPSAO96009 420 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 BRS3P32247 399 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 TMEM50BP56557 158 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 MXD1Q05195 221 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 PLAC9Q5JTB6 97 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 CCDC144NLQ6NUI1 221 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 SHISA2Q6UWI4 295 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms