RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TRAF3IP2O43734 574 aaPredicted RBP8.4□□□□□ -1.06
CLDN2-202ENST00000540876 GYPAP02724 150 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 STAG3L3P0CL85 134 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 PRDX1Q06830 199 aaKnown RBP8.4□□□□□ -1.06
CLDN2-202ENST00000540876 HSPB2Q16082 182 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 LPAL2Q16609 132 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 TMEM52BQ4KMG9 183 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 PHLDA2Q53GA4 152 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 ZNF440Q8IYI8 595 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 Q8N976 141 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 PLEKHF2Q9H8W4 249 aa8.4□□□□□ -1.06
CLDN2-202ENST00000540876 PHPT1Q9NRX4 125 aaPredicted RBP8.4□□□□□ -1.06
CLDN2-202ENST00000540876 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 LOC101059948A0A1B0GTJ6 334 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 NXPH3O95157 252 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 IFNA1P01562 189 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 PPP1CBP62140 327 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 LCN2P80188 198 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF154Q13106 437 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF542PQ5EBM4 170 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 CENPVQ7Z7K6 275 aaPredicted RBP8.4□□□□□ -1.07
CLDN2-202ENST00000540876 LYPD6Q86Y78 171 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 OR10W1Q8NGF6 305 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 OR2A1Q8NGT9 310 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 CPT1CQ8TCG5 803 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 FAM216AQ8WUB2 273 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 ZC2HC1AQ96GY0 325 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 VSIRQ9H7M9 311 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 CDC42EP3Q9UKI2 254 aa8.4□□□□□ -1.07
CLDN2-202ENST00000540876 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 IGHV2-26A0A0B4J1V2 119 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 IGKV1-8A0A0C4DH67 115 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 PROB1E7EW31 1015 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 MSTNO14793 375 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF737O75373 536 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 MC5RP33032 325 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 FXYD4P59646 89 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TMEM187Q14656 261 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 CNN3Q15417 329 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 KCTD18Q6PI47 426 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 RTN4IP1Q8WWV3 396 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ASB10Q8WXI3 467 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 COX14Q96I36 57 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TMEM59Q9BXS4 323 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ANAPC10Q9UM13 185 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TMEM14DPA8MWL7 114 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 NPIPB7O75200 414 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TIAF1O95411 115 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 NKX2-1P43699 371 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ARF3P61204 181 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ARF1P84077 181 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 EXT1Q16394 746 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ADAMTSL4Q6UY14 1074 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 OR10G6Q8NH81 332 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 DAZLQ92904 295 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 LIN37Q96GY3 246 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 ZNF48Q96MX3 618 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 DNAJB12Q9NXW2 375 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 TBL2Q9Y4P3 447 aaKnown RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 MPDZO75970 2070 aa8.39□□□□□ -1.07
CLDN2-202ENST00000540876 EP300Q09472 2414 aaPredicted RBP8.39□□□□□ -1.07
CLDN2-202ENST00000540876 IGKV1D-8A0A087WSZ0 117 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 OR6C6A6NF89 314 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 C9orf172C9J069 976 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 IGHV4-34P06331 123 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 PMCHP20382 165 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 S100GP29377 79 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 GNRHRP30968 328 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 RPS21P63220 83 aaKnown RBP8.38□□□□□ -1.07
CLDN2-202ENST00000540876 SRPXP78539 464 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 LRRC10Q5BKY1 277 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 RAET1LQ5VY80 246 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 OR2M3Q8NG83 312 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 KCNG3Q8TAE7 436 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 PLPPR1Q8TBJ4 325 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 TSPAN32Q96QS1 320 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 RSG1Q9BU20 258 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 NAA60Q9H7X0 242 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 NXT1Q9UKK6 140 aaKnown RBP8.38□□□□□ -1.07
CLDN2-202ENST00000540876 DOCK11Q5JSL3 2073 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 TTRP02766 147 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 MSR1P21757 451 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 CBLN1P23435 193 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 CEACAM3P40198 252 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 AMTP48728 403 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 RPS4XP62701 263 aaKnown RBP8.38□□□□□ -1.07
CLDN2-202ENST00000540876 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 AGMATQ9BSE5 352 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 PECRQ9BY49 303 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 NRN1Q9NPD7 142 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 WASHC3Q9Y3C0 194 aa8.38□□□□□ -1.07
CLDN2-202ENST00000540876 ASPMQ8IZT6 3477 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms