RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 BOD1L2Q8IYS8 172 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 OR4X2Q8NGF9 303 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 OR1K1Q8NGR3 316 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 OCIAD1Q9NX40 245 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 RARRES3Q9UL19 164 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 KCNE1BA0A087WTH5 132 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 M0QZQ0 153 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 PPYP01298 95 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 PQLC2Q6ZP29 291 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 MORN4Q8NDC4 146 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ASB10Q8WXI3 467 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ZFC3H1O60293 1989 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 PREX1Q8TCU6 1659 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 IGKV6D-21A0A0A0MT36 114 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 TNFSF15O95150 251 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 FCGR3AP08637 254 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 VAX1Q5SQQ9 334 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 PAQR9Q6ZVX9 377 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 NPEPL1Q8NDH3 523 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 GPR132Q9UNW8 380 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 MYH14Q7Z406 1995 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 TMEM202A6NGA9 273 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ASAH2BP0C7U1 165 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ORM2P19652 201 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 KIR2DL1P43626 348 aaPredicted RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 KIR2DL2P43627 348 aaPredicted RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 RAE1P78406 368 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 LAIR2Q6ISS4 152 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 SLC36A1Q7Z2H8 476 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 H1FXQ92522 213 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 ZNF414Q96IQ9 312 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 C11orf68Q9H3H3 251 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 HEXA-AS1Q9H8Q6 139 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 MMP25Q9NPA2 562 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
YBX3-208ENST00000540447 WNT16Q9UBV4 365 aa7.69□□□□□ -1.18
YBX3-208ENST00000540447 ATP5IP56385 69 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 DAPP1Q9UN19 280 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 TRAV8-6A0A0B4J262 113 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 TGFAP01135 160 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 P2RY2P41231 377 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 ZNF683Q8IZ20 524 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 OR1N1Q8NGS0 311 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 ABHD14AQ9BUJ0 271 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 COL1A1P02452 1464 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 RPL30P62888 115 aaKnown RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 CYP2G1PQ6ZSU1 146 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 BHLHA15Q7RTS1 189 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 FGF14Q92915 247 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 GPR27Q9NS67 375 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 CACNA1CQ13936 2221 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 ZNF865P0CJ78 1059 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 GPR3P46089 330 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 TBC1D28Q2M2D7 210 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 CA13Q8N1Q1 262 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 SLC25A38Q96DW6 304 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 MMP17Q9ULZ9 603 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 H3BNC9 293 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 RBP4P02753 201 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 ADMP35318 185 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 SRSF5Q13243 272 aaKnown RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 OR1F12Q8NHA8 337 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 SLC25A43Q8WUT9 341 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 FGF13Q92913 245 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 KLF16Q9BXK1 252 aaPredicted RBP7.68□□□□□ -1.18
YBX3-208ENST00000540447 IL36BQ9NZH7 164 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 PPLO60437 1756 aa7.68□□□□□ -1.18
YBX3-208ENST00000540447 A0A0G2JLM5 398 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 ZNF324O75467 553 aaPredicted RBP7.67□□□□□ -1.18
YBX3-208ENST00000540447 TMEM50AO95807 157 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 CKS2P33552 79 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 OR1B1Q8NGR6 318 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 OR10X1Q8NGY0 326 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 LOC105371242A0A075B767 164 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 TRAV5A0A0B4J249 113 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 PPIAL4CA0A0B4J2A2 164 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 TMEM30CPA0ZSE6 113 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 DHRS3O75911 302 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 ZNF205O95201 554 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 PPIAL4GP0DN37 164 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 PXNP49023 591 aaPredicted RBP7.67□□□□□ -1.18
YBX3-208ENST00000540447 PTX4Q96A99 478 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 MRGPRFQ96AM1 343 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 PERPQ96FX8 193 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 TRBV5-3A0A0A0MS03 114 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 TRAV14DV4A0A0A6YYC5 116 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 ODAMA1E959 279 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 ZNF716A6NP11 495 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 FGF16O43320 207 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 CXCL1P09341 107 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 ZNF735P0CB33 412 aa7.67□□□□□ -1.18
YBX3-208ENST00000540447 GZMBP10144 247 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms