RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 RTN4RL2Q86UN3 420 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 ZCCHC24Q8N2G6 241 aaKnown RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 ZNRF1Q8ND25 227 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 CD300LFQ8TDQ1 290 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 H1FXQ92522 213 aaKnown RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 MBD6Q96DN6 1003 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 YPEL2Q96QA6 119 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 SSBP3Q9BWW4 388 aaPredicted RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 TINAGL1Q9GZM7 467 aaPredicted RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 OR2S2Q9NQN1 319 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 FAM212BQ9NTI7 297 aaPredicted RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 ING3Q9NXR8 418 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 CALYQ9NYX4 217 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 ZNF230Q9UIE0 474 aaPredicted RBP9.82□□□□□ -0.84
VTN-202ENST00000539746 ZNF221Q9UK13 617 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 MAB21L2Q9Y586 359 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 RTTNQ86VV8 2226 aa9.82□□□□□ -0.84
VTN-202ENST00000539746 TEX13DA0A0J9YY54 714 aaPredicted RBP9.81□□□□□ -0.84
VTN-202ENST00000539746 F2RL2O00254 374 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 GPR31O00270 319 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 SSNA1O43805 119 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 HBZP02008 142 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 GSTT2P0CG29 244 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 GATA3P23771 443 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 RBMXP38159 391 aaKnown RBP9.81□□□□□ -0.84
VTN-202ENST00000539746 CDKN1AP38936 164 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 CEACAM6P40199 344 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 DHODHQ02127 395 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 TATDN3Q17R31 274 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 HEPN1Q6WQI6 88 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 LHFPL1Q86WI0 220 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 C8orf46Q8TAG6 207 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 ADTRPQ96IZ2 230 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 PSMG3-AS1Q96PY0 264 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 SLC6A7Q99884 636 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 SUCNR1Q9BXA5 334 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 MED28Q9H204 178 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 ZFP57Q9NU63 452 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 LIN7CQ9NUP9 197 aaKnown RBP9.81□□□□□ -0.84
VTN-202ENST00000539746 PIPOXQ9P0Z9 390 aa9.81□□□□□ -0.84
VTN-202ENST00000539746 AMMECR1Q9Y4X0 333 aaPredicted RBP9.81□□□□□ -0.84
VTN-202ENST00000539746 A0A0B4J2A0 478 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 DUXBA0A1W2PPF3 345 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 C12orf77C9JDV5 145 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 M0R1W7 72 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 SDCBPO00560 298 aaPredicted RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 ARPC1BO15143 372 aaKnown RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 TXNL1O43396 289 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 SSX4O60224 188 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 TUSC2O75896 110 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 RPA2P15927 270 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 COL8A2P25067 703 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 KIR2DS2P43631 304 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 GLIPR1P48060 266 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 CCR6P51684 374 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 PRRX1P54821 245 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 ERVFRD-1P60508 538 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 RND3P61587 244 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 CYCSP99999 105 aaKnown RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 NCR3LG1Q68D85 454 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 FAM71F2Q6NXP2 309 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 GLDNQ6ZMI3 551 aaPredicted RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 SLC25A42Q86VD7 318 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 H1FOOQ8IZA3 346 aaPredicted RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 PRR18Q8N4B5 295 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 FAM216BQ8N7L0 139 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 OR10V1Q8NGI7 309 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 PLPPR1Q8TBJ4 325 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 MRGPRDQ8TDS7 321 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 COQ2Q96H96 371 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 S1PR3Q99500 378 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 NEURL2Q9BR09 285 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 HDHD3Q9BSH5 251 aaPredicted RBP9.8□□□□□ -0.84
VTN-202ENST00000539746 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 HEXA-AS1Q9H8Q6 139 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
VTN-202ENST00000539746 ZFYVE26Q68DK2 2539 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 TRAV6A0A075B6T7 132 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 PPIAL4CA0A0B4J2A2 164 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 TNFRSF13BO14836 293 aaPredicted RBP9.79□□□□□ -0.84
VTN-202ENST00000539746 IFNA2P01563 188 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 IFNA21P01568 189 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 WNT2P09544 360 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 RCC1P18754 421 aaPredicted RBP9.79□□□□□ -0.84
VTN-202ENST00000539746 BTCP35070 178 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 CEBPDP49716 269 aaPredicted RBP9.79□□□□□ -0.84
VTN-202ENST00000539746 SRSF1Q07955 248 aaKnown RBP eCLIP9.79□□□□□ -0.84
VTN-202ENST00000539746 ZNF66Q6ZN08 573 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 OR13D1Q8NGV5 346 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
VTN-202ENST00000539746 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 DYRK2Q92630 601 aa9.79□□□□□ -0.84
VTN-202ENST00000539746 TOMM40LQ969M1 308 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms