RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 IMMP1LQ96LU5 166 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 SIRT7Q9NRC8 400 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 WDFY4Q6ZS81 3184 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 HMGB3O15347 200 aaKnown RBP17.33■□□□□ 0.36
TMEM260-203ENST00000539559 SYNGR1O43759 233 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 NAPSAO96009 420 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 B3GALT5-AS1P59052 145 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 BAXQ07812 192 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 WDR25Q64LD2 544 aaPredicted RBP17.33■□□□□ 0.36
TMEM260-203ENST00000539559 GGNQ86UU5 652 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 RPS19BP1Q86WX3 136 aaKnown RBP17.33■□□□□ 0.36
TMEM260-203ENST00000539559 STX12Q86Y82 276 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 SNIP1Q8TAD8 396 aaKnown RBP17.33■□□□□ 0.36
TMEM260-203ENST00000539559 IL1F10Q8WWZ1 152 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 FAM186AA6NE01 2351 aa17.33■□□□□ 0.36
TMEM260-203ENST00000539559 FGF5P12034 268 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 ELLP55199 621 aaPredicted RBP17.32■□□□□ 0.36
TMEM260-203ENST00000539559 IL24Q13007 206 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 PRDX4Q13162 271 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 KRTAP27-1Q3LI81 207 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 PRR18Q8N4B5 295 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 OR10D3Q8NH80 312 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 GPR35Q9HC97 309 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 LRFN1Q9P244 771 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 IFNA5P01569 189 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 C1orf87Q8N0U7 546 aa17.32■□□□□ 0.36
TMEM260-203ENST00000539559 NOSIPQ9Y314 301 aaKnown RBP17.32■□□□□ 0.36
TMEM260-203ENST00000539559 A0A1W2PR80 420 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 NTN3O00634 580 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-203ENST00000539559 CBR3O75828 277 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 HBE1P02100 147 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 CEACAM1P13688 526 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 FOXG1P55316 489 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-203ENST00000539559 CLDN15P56746 228 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 LPAL2Q16609 132 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 MUC3AQ02505 3323 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 ARGFXA6NJG6 315 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 CEBPZOSA8MTT3 80 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 BCL2P10415 239 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 CCL4P13236 92 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 TRA2AQ13595 282 aaKnown RBP eCLIP17.31■□□□□ 0.36
TMEM260-203ENST00000539559 AGBL5Q8NDL9 886 aa17.31■□□□□ 0.36
TMEM260-203ENST00000539559 PACRGQ96M98 296 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-203ENST00000539559 ERRFI1Q9UJM3 462 aaPredicted RBP17.31■□□□□ 0.36
TMEM260-203ENST00000539559 A0A1B0GU03 582 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 CLEC18AA5D8T8 446 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 TUSC2O75896 110 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 PTBP3O95758 552 aaKnown RBP17.3■□□□□ 0.36
TMEM260-203ENST00000539559 ZNF16P17020 682 aaPredicted RBP17.3■□□□□ 0.36
TMEM260-203ENST00000539559 CLEC18CQ8NCF0 446 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 OR51B6Q9H340 312 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 CACNG5Q9UF02 275 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 CLDN34H7C241 214 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 M0R296 226 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 KLF7O75840 302 aaPredicted RBP17.3■□□□□ 0.36
TMEM260-203ENST00000539559 F2RP25116 425 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 PCSK4Q6UW60 755 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 OR5D13Q8NGL4 314 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 CABLES2Q9BTV7 478 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 SF3B5Q9BWJ5 86 aaKnown RBP17.3■□□□□ 0.36
TMEM260-203ENST00000539559 PLK3Q9H4B4 646 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 UFSP2Q9NUQ7 469 aa17.3■□□□□ 0.36
TMEM260-203ENST00000539559 ESPL1Q14674 2120 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 SERPINE2P07093 398 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 MMP7P09237 267 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-203ENST00000539559 TUBG1P23258 451 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 HAPLN4Q86UW8 402 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 DMRTC2Q8IXT2 367 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-203ENST00000539559 CA5BP1Q8WTZ4 195 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 RCC1LQ96I51 464 aaKnown RBP17.29■□□□□ 0.36
TMEM260-203ENST00000539559 HIST1H2BLQ99880 126 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 OR1A1Q9P1Q5 309 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 KIAA1324LA8MWY0 1029 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-203ENST00000539559 H0Y980 276 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 CLN3Q13286 438 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 SCGB1C1Q8TD33 95 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 ZNF552Q9H707 407 aaPredicted RBP17.29■□□□□ 0.36
TMEM260-203ENST00000539559 SH2D2AQ9NP31 389 aa17.29■□□□□ 0.36
TMEM260-203ENST00000539559 LOC102723996A0A087X1L8 192 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 C5orf49A4QMS7 147 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 NGFP01138 241 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 IGKV1-39P01597 117 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 IGKV1D-39P04432 117 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 FGF12P61328 243 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 RBKSQ9H477 322 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 OR14J1Q9UGF5 321 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 TCFL5Q9UL49 500 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 PPP1R3CQ9UQK1 317 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 ATP23Q9Y6H3 246 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 ZNF503-AS2A6NEH8 195 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 LILRA1O75019 489 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 CNOT4O95628 575 aaKnown RBP17.28■□□□□ 0.36
TMEM260-203ENST00000539559 CYB5R3P00387 301 aaPredicted RBP17.28■□□□□ 0.36
TMEM260-203ENST00000539559 SRYQ05066 204 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 PRRG4Q9BZD6 226 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 SDF2L1Q9HCN8 221 aa17.28■□□□□ 0.36
TMEM260-203ENST00000539559 URB1O60287 2271 aaKnown RBP17.28■□□□□ 0.36
TMEM260-203ENST00000539559 PHOX2AO14813 284 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 CYC1P08574 325 aa17.27■□□□□ 0.36
TMEM260-203ENST00000539559 IL2RGP31785 369 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms