RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 GLDNQ6ZMI3 551 aaPredicted RBP7.48□□□□□ -1.21
GGA3-202ENST00000538886 ZNF573Q86YE8 665 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 BPIFB2Q8N4F0 458 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 TPRX1Q8N7U7 411 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 OR8G5Q8NG78 346 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 OR51A2Q8NGJ7 313 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 POFUT1Q9H488 388 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 METTL8Q9H825 291 aaKnown RBP7.48□□□□□ -1.21
GGA3-202ENST00000538886 RHOFQ9HBH0 211 aa7.48□□□□□ -1.21
GGA3-202ENST00000538886 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 C17orf100A8MU93 164 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 DEFB108AA8MXU0 73 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 TMEM127O75204 238 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 DCTDP32321 178 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.21
GGA3-202ENST00000538886 ZNF616Q08AN1 781 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 LBHQ53QV2 105 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 DCAF12L2Q5VW00 463 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 LPCAT3Q6P1A2 487 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 CCL13Q99616 98 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PCGF1Q9BSM1 259 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 SEBOXQ9HB31 216 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 TUBG2Q9NRH3 451 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 C19orf12Q9NSK7 152 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 ONECUT1Q9UBC0 465 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 RPH3ALQ9UNE2 315 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 FN1P02751 2386 aaKnown RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 COLCA2A8K830 154 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 FBXO24O75426 580 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 RBBP9O75884 186 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 HIST1H1BP16401 226 aaKnown RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 LCN2P80188 198 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 RHEBQ15382 184 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PCK2Q16822 640 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 DEGS2Q6QHC5 323 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 GLIPR1L1Q6UWM5 242 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 RNF141Q8WVD5 230 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 HPSE2Q8WWQ2 592 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 NEU1Q99519 415 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PIMREGQ9BSJ6 248 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 WDR13Q9H1Z4 485 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PIPOXQ9P0Z9 390 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 HMSDA8MTL9 139 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PRR32B1ATL7 298 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 MBPP02686 304 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 TPT1P13693 172 aaKnown RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 GTF2F2P13984 249 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 CEBPDP49716 269 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 FAM3AP98173 230 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 TPBGQ13641 420 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PCGF3Q3KNV8 242 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 OR10J5Q8NHC4 309 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 ADAT3Q96EY9 351 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 MOB1AQ9H8S9 216 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 YAE1D1Q9NRH1 226 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 PLEKHJ1Q9NW61 149 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 CLN8Q9UBY8 286 aa7.47□□□□□ -1.21
GGA3-202ENST00000538886 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 COL27A1Q8IZC6 1860 aaPredicted RBP7.47□□□□□ -1.21
GGA3-202ENST00000538886 KCNAB3O43448 404 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 SCGNO76038 276 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 SCAF4O95104 1147 aaKnown RBP7.46□□□□□ -1.21
GGA3-202ENST00000538886 ACKR3P25106 362 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 PDLIM4P50479 330 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 MMP16P51512 607 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 HIST3H3Q16695 136 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 AWAT1Q58HT5 328 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 HACD4Q5VWC8 232 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 OR51D1Q8NGF3 324 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 TERB2Q8NHR7 220 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 RFESDQ8TAC1 157 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 LGALS14Q8TCE9 139 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 RGP1Q92546 391 aaPredicted RBP7.46□□□□□ -1.21
GGA3-202ENST00000538886 FOXRED1Q96CU9 486 aaPredicted RBP7.46□□□□□ -1.21
GGA3-202ENST00000538886 SMIM19Q96E16 107 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 SEC11CQ9BY50 192 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 BPESC1Q9GZL8 116 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 CXXC4Q9H2H0 198 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 SPACA1Q9HBV2 294 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 POLDIP2Q9Y2S7 368 aa7.46□□□□□ -1.21
GGA3-202ENST00000538886 PPIAL4EA0A075B759 164 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 LOC102724200A0A096LPH7 203 aaPredicted RBP7.46□□□□□ -1.22
GGA3-202ENST00000538886 NKX6-3A6NJ46 265 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 PPIAL4DF5H284 164 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 M0R143 59 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 WNT9BO14905 357 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 EREGO14944 169 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 DIRAS3O95661 229 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 PRH1P02810 166 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 NPSP0C0P6 89 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 PPIAL4FP0DN26 164 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 TPRA1Q86W33 373 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 SYS1Q8N2H4 156 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 DCUN1D4Q92564 292 aa7.46□□□□□ -1.22
GGA3-202ENST00000538886 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms