RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 GPR61Q9BZJ8 451 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 EGLN1Q9GZT9 426 aa9.14□□□□□ -0.95
CLIP1-210ENST00000538120 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A10PA6NDY2 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A18PA6NE21 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A16PA6NEW6 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A20PA6NIJ5 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A8PA6NJQ4 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A7PA6NKC0 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A22PA8MWA6 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A12PA8MX19 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A5PA8MXJ8 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A23PA8MXZ1 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 J3QW42 95 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 K7EPK0 472 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 OR7C1O76099 320 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-210ENST00000538120 AGFG2O95081 481 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FABP1P07148 127 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A15PP0C7V4 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A13PP0C7W8 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A14PP0C7W9 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM90A24PP0C7X0 464 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FOLR2P14207 255 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 PPP1CBP62140 327 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-210ENST00000538120 ALKBH6Q3KRA9 238 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 AWAT1Q58HT5 328 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 MKXQ8IYA7 352 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF610Q8N9Z0 462 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 MRPL24Q96A35 216 aaKnown RBP9.13□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF488Q96MN9 340 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 SCGB3A2Q96PL1 93 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 OR2J1Q9GZK6 312 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 OR51I2Q9H344 312 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 PARP11Q9NR21 331 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 URB1O60287 2271 aaKnown RBP9.13□□□□□ -0.95
CLIP1-210ENST00000538120 LAMA5O15230 3695 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 TRAV20A0A0B4J274 112 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 hCG_1809904A0A1W2PP81 198 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 A0A1W2PR64 198 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 A0A1W2PRV1 198 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 C1QL1O75973 258 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 PET100P0DJ07 73 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 OR5H8P0DN80 308 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 FABP9Q0Z7S8 132 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 MIDNQ504T8 468 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 TMEM211Q6ICI0 200 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 WDR86Q86TI4 376 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 C15orf54Q8N8G6 183 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 OPN3Q9H1Y3 402 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-210ENST00000538120 CDH20Q9HBT6 801 aa9.13□□□□□ -0.95
CLIP1-210ENST00000538120 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 MBD3L4A6NDZ8 208 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 MBD3L3A6NE82 208 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 MBD3L5A6NJ08 208 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 OR5B21A6NL26 309 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 IGKV3-15P01624 115 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 ARG1P05089 322 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 GLI4P10075 376 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 GNG3P63215 75 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 SP6Q3SY56 376 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 EIF5AL1Q6IS14 154 aaKnown RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 MBD3L2Q8NHZ7 208 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 SLC25A40Q8TBP6 338 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 EXTL1Q92935 676 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 SPXQ9BT56 116 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 SCRT1Q9BWW7 348 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF442Q9H7R0 627 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 CEP250Q9BV73 2442 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 A0A1B0GV50 99 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 A4D1N5 150 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 TAAR5O14804 337 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 DEDDO75618 318 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 IFNA2P01563 188 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 RBMXP38159 391 aaKnown RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 UCP2P55851 309 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF616Q08AN1 781 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 IL24Q13007 206 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 MRPL49Q13405 166 aaKnown RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 CXorf67Q86X51 503 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 ABHD17AQ96GS6 310 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF71Q9NQZ8 489 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-210ENST00000538120 NECAP2Q9NVZ3 263 aa9.12□□□□□ -0.95
CLIP1-210ENST00000538120 PRRC2CQ9Y520 2896 aaKnown RBP9.11□□□□□ -0.95
CLIP1-210ENST00000538120 M0R036 132 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 WDR1O75083 606 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 RHBDL1O75783 438 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 SCAF4O95104 1147 aaKnown RBP9.11□□□□□ -0.95
CLIP1-210ENST00000538120 TSPAN15O95858 294 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-210ENST00000538120 AGAP20933 346 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms