RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FAM162BQ5T6X4 162 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 FAM183BPQ6ZVS7 135 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 SSX7Q7RTT5 188 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 ST13P4Q8IZP2 240 aaPredicted RBP1□□□□□ -2.25
CCDC7-208ENST00000537047 MBOAT7Q96N66 472 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 TMBIM4Q9HC24 238 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 MINOS1-NBL1R4GNA1 71 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 COL4A2P08572 1712 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 COL4A1P02462 1669 aa1□□□□□ -2.25
CCDC7-208ENST00000537047 ARAP3Q8WWN8 1544 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 PXDNLA1KZ92 1463 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 TNIKQ9UKE5 1360 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 USP42Q9H9J4 1324 aaKnown RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 TRGV2A0A075B6R0 118 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 MUC21A0A0G2JKD1 596 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 MUC21A0A140T8X8 626 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 RAB19A4D1S5 217 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CDIPTO14735 213 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 FABP7O15540 132 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 LTAP01374 205 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CRYGDP07320 174 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 SPNP16150 400 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 ZNF3P17036 446 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 UGT2B10P36537 528 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 AKR1C2P52895 323 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 MP68P56378 58 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CD164Q04900 197 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 Q6ZT83 130 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CLEC20AQ6ZU45 233 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 OR2AE1Q8NHA4 323 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 ZNRF2Q8NHG8 242 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CD200R1Q8TD46 325 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 IFT81Q8WYA0 676 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 TMBIM1Q969X1 311 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 MRPS24Q96EL2 167 aaKnown RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 NAA38Q9BRA0 125 aaKnown RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 FAAP24Q9BTP7 215 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 HINT2Q9BX68 163 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 EBPLQ9BY08 206 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 MRPL32Q9BYC8 188 aaKnown RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 RAB1BQ9H0U4 201 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 ALX4Q9H161 411 aaPredicted RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 NDUFB11Q9NX14 153 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 PSMD13Q9UNM6 376 aa0.99□□□□□ -2.25
CCDC7-208ENST00000537047 TBL2Q9Y4P3 447 aaKnown RBP0.99□□□□□ -2.25
CCDC7-208ENST00000537047 CRB1P82279 1406 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 NDUFS8O00217 210 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 PSMD11O00231 422 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 CRXO43186 299 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 FGF16O43320 207 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 SHOX2O60902 331 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 NAPSAO96009 420 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 CCDC172P0C7W6 258 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 GABRA3P34903 492 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 RAB2AP61019 212 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 C18orf21Q32NC0 220 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 BSXQ3C1V8 233 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 MRPL52Q86TS9 123 aaKnown RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 LRRC20Q8TCA0 184 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 FAM45AQ8TCE6 357 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 TMEM239Q8WW34 195 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 MSANTD3Q96H12 275 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 GPR22Q99680 433 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 PRSS27Q9BQR3 290 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 TAPBPLQ9BX59 468 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 POTEKPQ9BYX7 375 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 CLEC2DQ9UHP7 191 aa0.98□□□□□ -2.25
CCDC7-208ENST00000537047 RBMX2Q9Y388 322 aaKnown RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 TRPM3Q9HCF6 1732 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-208ENST00000537047 CACNA1SQ13698 1873 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 IGLV3-9A0A075B6K5 115 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 A0A0G2JQZ4 141 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 VPS37CA5D8V6 355 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-208ENST00000537047 K7EQS6 105 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 HINT1P49773 126 aaPredicted RBP0.97□□□□□ -2.25
CCDC7-208ENST00000537047 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
CCDC7-208ENST00000537047 SDIM1Q6ZPB5 146 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 FAM19A3Q7Z5A8 133 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 OR4X2Q8NGF9 303 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 CATSPER2Q96P56 530 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 HSPB9Q9BQS6 159 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 SPZ1Q9BXG8 430 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 DOK5Q9P104 306 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 RTEL1-TNFRSF6BF6WH68 1400 aa0.97□□□□□ -2.25
CCDC7-208ENST00000537047 A0A1B0GW15 77 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 H3BSA7 217 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 BOLA2-SMG1P6H3BVE0 249 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 IVLP07476 585 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 FBP1P09467 338 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 LYNX1P0DP58 116 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 ATF1P18846 271 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 ALOX5APP20292 161 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 TNNC1P63316 161 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 PSG3Q16557 428 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 ZFAND2AQ8N6M9 145 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 TRIML2Q8N7C3 387 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 CDRT4Q8N9R6 151 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 OR2Y1Q8NGV0 311 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 OR5P2Q8WZ92 322 aa0.96□□□□□ -2.26
CCDC7-208ENST00000537047 GALMQ96C23 342 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms