RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	DOLPP1	Q86YN1	238 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	FUNDC1	Q8IVP5	155 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	OR5P3	Q8WZ94	311 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	GALM	Q96C23	342 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	SMIM12	Q96EX1	92 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	ZNF514	Q96K75	400 aa	Predicted RBP	2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	GPR22	Q99680	433 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	EBNA1BP2	Q99848	306 aa	Known RBP	2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	B9D2	Q9BPU9	175 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	TMEM208	Q9BTX3	173 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	SLC23A2	Q9UGH3	650 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	RPUSD1	Q9UJJ7	312 aa	Known RBP	2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	CCDC180	Q9P1Z9	1646 aa		2.71	□□□□□ -1.98
PRKDC-208	ENST00000536710	DAPL1	A0PJW8	107 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	FABP12	A6NFH5	140 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	LTA	P01374	205 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	OR12D1	P0DN82	309 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	PSMB6	P28072	239 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	CD40LG	P29965	261 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	DEFA6	Q01524	100 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	MAPK14	Q16539	360 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	EXOC3L4	Q17RC7	722 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	EBLN2	Q6P2I7	272 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	LRP11	Q86VZ4	500 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	HS3ST5	Q8IZT8	346 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	BLID	Q8IZY5	108 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	MUC7	Q8TAX7	377 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	PKMYT1	Q99640	499 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	HIGD2A	Q9BW72	106 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	EURL	Q9NYK6	297 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	TMEM216	Q9P0N5	145 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	SEC16A	O15027	2179 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	MIA3	Q5JRA6	1907 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	PLXNB3	Q9ULL4	1909 aa		2.7	□□□□□ -1.98
PRKDC-208	ENST00000536710	SPATA31E1	Q6ZUB1	1445 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	THADA	Q6YHU6	1953 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	IGKV1D-37	A0A075B6S9	117 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	GOLGA6L10	A6NI86	522 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	PSCA	O43653	123 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	ADAP1	O75689	374 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	SOX14	O95416	240 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	ORM1	P02763	201 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	TPM3	P06753	285 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	CTSE	P14091	401 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	MAP3K7CL	P57077	242 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	TPM4	P67936	248 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	C1D	Q13901	141 aa	Known RBP	2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	C10orf91	Q5T1B1	145 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	HES3	Q5TGS1	186 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	VN1R4	Q7Z5H5	301 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	LYPD6	Q86Y78	171 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	C2orf73	Q8N5S3	287 aa	Predicted RBP	2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	LY6G5B	Q8NDX9	201 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	OR5K1	Q8NHB7	308 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	RBP7	Q96R05	134 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	METTL9	Q9H1A3	318 aa		2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	ZNHIT6	Q9NWK9	470 aa	Known RBP	2.69	□□□□□ -1.98
PRKDC-208	ENST00000536710	MYO15B	Q96JP2	1530 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	IGHV3OR15-7	A0A075B7D8	119 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	FTCDNL1	E5RQL4	147 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710		M0QYV0	167 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	SLC31A1	O15431	190 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	FBP1	P09467	338 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	CRABP1	P29762	137 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	PYCR3	Q53H96	274 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	NOXRED1	Q6NXP6	359 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	PLEKHG7	Q6ZR37	379 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	OR5L1	Q8NGL2	311 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	STOML3	Q8TAV4	291 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	TAMM41	Q96BW9	452 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	KRTAP4-4	Q9BYR3	166 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	ZNF286A	Q9HBT8	521 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	GLS2	Q9UI32	602 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	WASHC3	Q9Y3C0	194 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	PUS1	Q9Y606	427 aa	Known RBP eCLIP	2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	DYSF	O75923	2080 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	PTPRK	Q15262	1439 aa		2.68	□□□□□ -1.98
PRKDC-208	ENST00000536710	C1orf232	A0A0U1RR37	186 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	KLRC4-KLRK1	H3BQV0	150 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	LECT2	O14960	151 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	SLC25A20	O43772	301 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	ARL6IP5	O75915	188 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	ORM2	P19652	201 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	AGTR1	P30556	359 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	CST6	Q15828	149 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	CLEC12B	Q2HXU8	276 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	TRMT12	Q53H54	448 aa	Known RBP	2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	SDHAF4	Q5VUM1	108 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	MSRB3	Q8IXL7	192 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710		Q8NAQ8	132 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	DNAJB3	Q8WWF6	145 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	OR8B2	Q96RD0	313 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	WDR54	Q9H977	334 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	LINC00588	Q9Y4M8	146 aa		2.67	□□□□□ -1.98
PRKDC-208	ENST00000536710	IGKV1-12	A0A0C4DH73	117 aa		2.66	□□□□□ -1.98
PRKDC-208	ENST00000536710		A0A1B0GU33	70 aa		2.66	□□□□□ -1.98
PRKDC-208	ENST00000536710	METTL15	A6NJ78	407 aa		2.66	□□□□□ -1.98
PRKDC-208	ENST00000536710	CCRL2	O00421	344 aa		2.66	□□□□□ -1.98
PRKDC-208	ENST00000536710	IGKV1D-12	P01611	117 aa		2.66	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms