RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 FAM46BQ96A09 425 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 SEC22AQ96IW7 307 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 PKIBQ9C010 78 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 RAB1BQ9H0U4 201 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 PARP11Q9NR21 331 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 FBN2P35556 2912 aa10.37□□□□□ -0.75
SCARB1-204ENST00000535005 RNASEK-C17orf49H0YIS7 233 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 TNFRSF1AP19438 455 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 FAM189A2Q15884 450 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 ZNF260Q3ZCT1 412 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 C11orf53Q8IXP5 236 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 SAXO1Q8IYX7 474 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 ZSCAN4Q8NAM6 433 aaPredicted RBP10.36□□□□□ -0.75
SCARB1-204ENST00000535005 NANPQ8TBE9 248 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 ITLN1Q8WWA0 313 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 NEU4Q8WWR8 484 aaPredicted RBP10.36□□□□□ -0.75
SCARB1-204ENST00000535005 MALSU1Q96EH3 234 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 SPACA5Q96QH8 159 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 AKAP6Q13023 2319 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 DSCAMO60469 2012 aa10.36□□□□□ -0.75
SCARB1-204ENST00000535005 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 J3QT63 122 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CCSO14618 274 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 BPNT1O95861 308 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 GRPP07492 148 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 SFTA3P0C7M3 94 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CFHR2P36980 270 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 HAAOP46952 286 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 DVL1P1P54792 670 aaPredicted RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 F2RL1P55085 397 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CCL8P80075 99 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 IL24Q13007 206 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 SPRNQ5BIV9 151 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 OR10K2Q6IF99 312 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CALHM1Q8IU99 346 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 ARRDC1Q8N5I2 433 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 JAGN1Q8N5M9 183 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 PNLDC1Q8NA58 520 aaKnown RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 SCCPDHQ8NBX0 429 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 Q8TCH9 128 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 TCTEX1D2Q8WW35 142 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 RNF126Q9BV68 326 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CNTD2Q9H8S5 307 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 DECR2Q9NUI1 292 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 ANAPC10Q9UM13 185 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 GAPDHP04406 335 aaKnown RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 IFNA6P05013 189 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 SULT1A2P50226 295 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 KRTAP10-9P60411 292 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 MRPS11P82912 194 aaKnown RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 TMEM128Q5BJH2 165 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 IGSF11Q5DX21 431 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 VAX1Q5SQQ9 334 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 TRAPPC6BQ86SZ2 158 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 MKXQ8IYA7 352 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 GPER1Q99527 375 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 CCL19Q99731 98 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 FN3KRPQ9HA64 309 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 SAP30LQ9HAJ7 183 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 GCM1Q9NP62 436 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 ZNF701Q9NV72 531 aaPredicted RBP10.35□□□□□ -0.75
SCARB1-204ENST00000535005 GHRLQ9UBU3 117 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 APCP25054 2843 aa10.35□□□□□ -0.75
SCARB1-204ENST00000535005 IFNL4K9M1U5 179 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 CDIPTO14735 213 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 SSX5O60225 188 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 FBP1P09467 338 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 PAX1P15863 534 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 OR3A4PP47883 348 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 AKR1C2P52895 323 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 SNRPEP62304 92 aaKnown RBP10.34□□□□□ -0.75
SCARB1-204ENST00000535005 AKR1C1Q04828 323 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 BTNL8Q6UX41 500 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 OR4D6Q8NGJ1 314 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 SELENOIQ9C0D9 397 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 LIME1Q9H400 295 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 POLDIP2Q9Y2S7 368 aa10.34□□□□□ -0.75
SCARB1-204ENST00000535005 SFT2D2O95562 160 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 F12P00748 615 aaPredicted RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 CSTBP04080 98 aaKnown RBP10.33□□□□□ -0.76
SCARB1-204ENST00000535005 FCGR3AP08637 254 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM225BP0DP42 221 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 FOSL1P15407 271 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 VAMP1P23763 118 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 CDKN1AP38936 164 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 GLP1RP43220 463 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 ZNF600Q6ZNG1 722 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 SLC25A26Q70HW3 274 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 C1QL2Q7Z5L3 287 aa10.33□□□□□ -0.76
SCARB1-204ENST00000535005 MOGAT3Q86VF5 341 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms