RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TMEM104Q8NE00 496 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 SMIM19Q96E16 107 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 MRPS24Q96EL2 167 aaKnown RBP13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CHCHD6Q9BRQ6 235 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 DCLRE1BQ9H816 532 aa13.75□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 VDAC1P21796 283 aa13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 RAB25P57735 213 aa13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 MED21Q13503 144 aa13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 SLC25A48Q6ZT89 311 aaKnown RBP13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 S1PR3Q99500 378 aa13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CHCHD3Q9NX63 227 aaKnown RBP13.74□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 MCRIP1C9JLW8 97 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CA11O75493 328 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 GPX5O75715 221 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGHG4P01861 327 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 MT-ND4P03905 459 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 RPLP1P05386 114 aaKnown RBP13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 MYL12AP19105 171 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 SOX6P35712 828 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ZNF555Q8NEP9 628 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CCDC107Q8WV48 283 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 C4orf3Q8WVX3 66 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 APH1BQ8WW43 257 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 RDH12Q96NR8 316 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ZNF184Q99676 751 aaPredicted RBP13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 RCC2Q9P258 522 aaKnown RBP13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 GNG12Q9UBI6 72 aa13.73□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 DNAH9Q9NYC9 4486 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 OGG1O15527 345 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGFBP3P17936 291 aaPredicted RBP13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 SLC22A6Q4U2R8 563 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 YIF1BQ5BJH7 314 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 STEAP3Q658P3 488 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 LCNL1Q6ZST4 164 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 TFAP2CQ92754 450 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 PLSCR3Q9NRY6 295 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 TRAPPC2LQ9UL33 140 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 EXOSC1Q9Y3B2 195 aaKnown RBP13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 NBEAL2Q6ZNJ1 2754 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 KMT2CQ8NEZ4 4911 aaKnown RBP13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 TENM3Q9P273 2699 aa13.72□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 TRBV5-5A0A0J9YX44 114 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 FAM90A10PA6NDY2 464 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 FAM90A7PA6NKC0 464 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 LINC01548A6NM66 108 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 FAM90A23PA8MXZ1 464 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGF1P05019 195 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 FSTP19883 344 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CFHR3Q02985 330 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 Q499Y3 187 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 XAF1Q6GPH4 301 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ZNF554Q86TJ5 538 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 CDH26Q8IXH8 852 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 DUX3Q96PT4 197 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 BABAM2Q9NXR7 383 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 ETAA1Q9NY74 926 aa13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.21
CKLF-CMTM1-202ENST00000527845 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 C12orf77C9JDV5 145 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 LANCL1O43813 399 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 GLAP06280 429 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 ETV1P50549 477 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 FHL3Q13643 280 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 DEFB136Q30KP8 78 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SYT6Q5T7P8 510 aaPredicted RBP13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 GAPTQ8N292 157 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 PQLC1Q8N2U9 271 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 ZNF107Q9UII5 783 aaPredicted RBP13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 MRPS28Q9Y2Q9 187 aaKnown RBP13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 U3KQK5 164 aa13.7□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 WBP4O75554 376 aaKnown RBP13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 HBZP02008 142 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 PSMB8P28062 276 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 INSL3P51460 131 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 TAS2R43P59537 309 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 RAB12Q6IQ22 244 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 UBALD1Q8TB05 177 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 THRSPQ92748 146 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 GHSRQ92847 366 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 S100A14Q9HCY8 104 aa13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SMPD3Q9NY59 655 aaPredicted RBP13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 LSM4Q9Y4Z0 139 aaKnown RBP13.69□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 A0A1W2PP11 408 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SLC31A2O15432 143 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SC5DO75845 299 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 OR8U8P0C7N1 319 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 VSIG8P0DPA2 414 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 LSAMPQ13449 338 aa13.68□□□□□ -0.22
CKLF-CMTM1-202ENST00000527845 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms