RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 MRGPRDQ8TDS7 321 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 HSPB9Q9BQS6 159 aa11.15□□□□□ -0.62
CPSF1-201ENST00000526271 IGHV1-3A0A0C4DH29 117 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ZFPL1O95159 310 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 CYB5AP00167 134 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
CPSF1-201ENST00000526271 SLC6A1P30531 599 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 REG1BP48304 166 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 PAX5Q02548 391 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ZNF816Q0VGE8 651 aaPredicted RBP11.14□□□□□ -0.63
CPSF1-201ENST00000526271 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
CPSF1-201ENST00000526271 TPBGQ13641 420 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 HES1Q14469 280 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 PIGYQ3MUY2 71 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ZNF529Q6P280 563 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ZNF367Q7RTV3 350 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 OR51A2Q8NGJ7 313 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 UBALD1Q8TB05 177 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 SMIM19Q96E16 107 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 MGLLQ99685 303 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 ABCG5Q9H222 651 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 OR6C3Q9NZP0 311 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 GLS2Q9UI32 602 aa11.14□□□□□ -0.63
CPSF1-201ENST00000526271 MEIKINA0A087WXM9 373 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 MAGEA13PA6NCF6 341 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 H3BUI4 141 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 SLC31A2O15432 143 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 CPEP16870 476 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 CELP19835 753 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 ECI1P42126 302 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 ARHGDIBP52566 201 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 RAB25P57735 213 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 MADCAM1Q13477 382 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 KISS1Q15726 138 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 ELP2Q6IA86 826 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 COMMD1Q8N668 190 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 Q8NFD4 153 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 OR10K1Q8NGX5 313 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 OR5AK2Q8NH90 309 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 RGP1Q92546 391 aaPredicted RBP11.13□□□□□ -0.63
CPSF1-201ENST00000526271 FCGR1BQ92637 280 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 GHSRQ92847 366 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 PGLYRP3Q96LB9 341 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 PDCD1LG2Q9BQ51 273 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
CPSF1-201ENST00000526271 C3orf84H3BNL1 204 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 GABRPO00591 440 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 HSD17B6O14756 317 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 RAMP3O60896 148 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 OCM2P0CE71 109 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 OCMP0CE72 109 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-201ENST00000526271 ZNF20P17024 532 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-201ENST00000526271 F2RL1P55085 397 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 RPS11P62280 158 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPSF1-201ENST00000526271 PNLIPRP3Q17RR3 467 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 PAN3Q58A45 887 aaKnown RBP11.12□□□□□ -0.63
CPSF1-201ENST00000526271 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-201ENST00000526271 TGIF2LXQ8IUE1 241 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 IZUMO1Q8IYV9 350 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 ZFP41Q8N8Y5 198 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 PCDHB16Q9NRJ7 776 aa11.12□□□□□ -0.63
CPSF1-201ENST00000526271 HSMCR30P0CW71 290 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 TMEM225BP0DP42 221 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 MTNR1BP49286 362 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 RAB7AP51149 207 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 YIF1BQ5BJH7 314 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 UNQ9370/PRO34162Q6UXP9 181 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 FAM71E2Q8N5Q1 922 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 ZNF439Q8NDP4 499 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 UFD1Q92890 307 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 MUL1Q969V5 352 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 RHOFQ9HBH0 211 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 NEK6Q9HC98 313 aa11.11□□□□□ -0.63
CPSF1-201ENST00000526271 AMMECR1Q9Y4X0 333 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-201ENST00000526271 TRBV5-5A0A0J9YX44 114 aa11.1□□□□□ -0.63
CPSF1-201ENST00000526271 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
CPSF1-201ENST00000526271 AP4M1O00189 453 aa11.1□□□□□ -0.63
CPSF1-201ENST00000526271 CCRL2O00421 344 aa11.1□□□□□ -0.63
CPSF1-201ENST00000526271 IGHG4P01861 327 aa11.1□□□□□ -0.63
CPSF1-201ENST00000526271 PSMB8P28062 276 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms