RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PROK1P58294 105 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 HABP2Q14520 560 aaPredicted RBP14.34□□□□□ -0.11
CLK4-211ENST00000522556 Q6ZS46 218 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 PRR18Q8N4B5 295 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 FAM3DQ96BQ1 224 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 HDHD3Q9BSH5 251 aaPredicted RBP14.34□□□□□ -0.11
CLK4-211ENST00000522556 OR51E2Q9H255 320 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 RNF167Q9H6Y7 350 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
CLK4-211ENST00000522556 TMEM272A0A1B0GTI8 110 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 FOXI3A8MTJ6 420 aaPredicted RBP14.33□□□□□ -0.12
CLK4-211ENST00000522556 F2RL2O00254 374 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 SDCBPO00560 298 aaPredicted RBP14.33□□□□□ -0.12
CLK4-211ENST00000522556 HBZP02008 142 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 DYNLT3P51808 116 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 EFNB2P52799 333 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 GNMTQ14749 295 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 OR10V1Q8NGI7 309 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 FCGR1BQ92637 280 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 C16orf95Q9H693 158 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 TXNL4BQ9NX01 149 aaKnown RBP14.33□□□□□ -0.12
CLK4-211ENST00000522556 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.12
CLK4-211ENST00000522556 FBN3Q75N90 2809 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 TRAV1-2A0A0B4J238 106 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 A0A1W2PPI3 338 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 POM121CA8CG34 1229 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 LEUTXA8MZ59 168 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 ORC5O43913 435 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 SLC2A2P11168 524 aaPredicted RBP14.32□□□□□ -0.12
CLK4-211ENST00000522556 GZMHP20718 246 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 MYL9P24844 172 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 BLVRBP30043 206 aaPredicted RBP14.32□□□□□ -0.12
CLK4-211ENST00000522556 C2orf76Q3KRA6 126 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 SHISA2Q6UWI4 295 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 OR2W3Q7Z3T1 314 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 NEDD4LQ96PU5 975 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 ZNF702PQ9H963 129 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 MBNL3Q9NUK0 354 aaKnown RBP14.32□□□□□ -0.12
CLK4-211ENST00000522556 STUB1Q9UNE7 303 aa14.32□□□□□ -0.12
CLK4-211ENST00000522556 GADD45AP24522 165 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 VEGFCP49767 419 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 PRRX1P54821 245 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 TMEM50BP56557 158 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 MOGAT2Q3SYC2 334 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 FAM89BQ8N5H3 189 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 ZNF439Q8NDP4 499 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 OR10A7Q8NGE5 316 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 OR52L2PQ8NGH6 319 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 TOMM40LQ969M1 308 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 STEAP1Q9UHE8 339 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 AK3Q9UIJ7 227 aa14.31□□□□□ -0.12
CLK4-211ENST00000522556 SH2D7A6NKC9 451 aaPredicted RBP14.3□□□□□ -0.12
CLK4-211ENST00000522556 IFITM5A6NNB3 132 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 TIMM23O14925 209 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 GLAP06280 429 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 CLEC2LP0C7M8 214 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 RAB3BP20337 219 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 REG1BP48304 166 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 ZNF134P52741 427 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 PLAC9Q5JTB6 97 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 C6orf183Q5T699 404 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 OR56B4Q8NH76 319 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 CFHR4Q92496 578 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 RPEQ96AT9 228 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 ARHGAP5-AS1Q96IT6 56 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 FBLN5Q9UBX5 448 aa14.3□□□□□ -0.12
CLK4-211ENST00000522556 A0A1B0GUS0 222 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 CA11O75493 328 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 NAPSAO96009 420 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 GALP22466 123 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 FGF9P31371 208 aaPredicted RBP14.29□□□□□ -0.12
CLK4-211ENST00000522556 TGFBR1P36897 503 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 BLCAPP62952 87 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 HMGN3Q15651 99 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 DRAM1Q8N682 238 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 OR4C13Q8NGP0 309 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 CITED1Q99966 193 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 CHCHD6Q9BRQ6 235 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 PECRQ9BY49 303 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 NPFFR1Q9GZQ6 430 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 LIN7BQ9HAP6 207 aa14.29□□□□□ -0.12
CLK4-211ENST00000522556 IGHV3-72A0A0B4J1Y9 119 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 PDCD5O14737 125 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 SPINT2O43291 252 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 PPP1CCP36873 323 aaKnown RBP14.28□□□□□ -0.12
CLK4-211ENST00000522556 CEACAM3P40198 252 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 KIR2DS4P43632 304 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 MADCAM1Q13477 382 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 CT45A1Q5HYN5 189 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 LIAT1Q6ZQX7 453 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 OR10X1Q8NGY0 326 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 CT45A3Q8NHU0 189 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 URM1Q9BTM9 101 aaKnown RBP14.28□□□□□ -0.12
CLK4-211ENST00000522556 CENPOQ9BU64 300 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 PARP12Q9H0J9 701 aaKnown RBP14.28□□□□□ -0.12
CLK4-211ENST00000522556 SERTAD4Q9NUC0 356 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 PLEKHJ1Q9NW61 149 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms