RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
MRPS28-204ENST00000519120 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
MRPS28-204ENST00000519120 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
MRPS28-204ENST00000519120 GHRLQ9UBU3 117 aa12.49□□□□□ -0.41
MRPS28-204ENST00000519120 NOTCH3Q9UM47 2321 aa12.49□□□□□ -0.41
MRPS28-204ENST00000519120 MYL12BO14950 172 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 SC5DO75845 299 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 CD1BP29016 333 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 WNT4P56705 351 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 SLC35B1P78383 322 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 RCN1Q15293 331 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 C6orf183Q5T699 404 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 LAIR2Q6ISS4 152 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 FOXRED2Q8IWF2 684 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 TMEM104Q8NE00 496 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 OR51D1Q8NGF3 324 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 OR2T10Q8NGZ9 312 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
MRPS28-204ENST00000519120 LIN7CQ9NUP9 197 aaKnown RBP12.48□□□□□ -0.41
MRPS28-204ENST00000519120 A0A1W2PPE3 182 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 C12orf77C9JDV5 145 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 SPINT2O43291 252 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 CELP19835 753 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
MRPS28-204ENST00000519120 HNF4GQ14541 408 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 KHDC1LQ5JSQ8 128 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 SYT6Q5T7P8 510 aaPredicted RBP12.47□□□□□ -0.41
MRPS28-204ENST00000519120 OGFRL1Q5TC84 451 aaPredicted RBP12.47□□□□□ -0.41
MRPS28-204ENST00000519120 AWAT2Q6E213 333 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 MOB3BQ86TA1 216 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 ZNF439Q8NDP4 499 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 CCDC107Q8WV48 283 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 Q96M66 194 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 ABCG5Q9H222 651 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 FKBP14Q9NWM8 211 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 TRAPPC2LQ9UL33 140 aa12.47□□□□□ -0.41
MRPS28-204ENST00000519120 GNAO1P09471 354 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 MGMTP16455 207 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 FUT3P21217 361 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 REG1BP48304 166 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 RNLSQ5VYX0 342 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 AHSA2Q719I0 299 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 STPG2Q8N412 459 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
MRPS28-204ENST00000519120 PEX16Q9Y5Y5 336 aa12.46□□□□□ -0.41
MRPS28-204ENST00000519120 A0A1W2PPK0 400 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 AP4M1O00189 453 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 MOSP00540 346 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 MAS1P04201 325 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 THBS3P49746 956 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 MS4A15Q8N5U1 240 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 Q8N9W7 124 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 NOL4LQ96MY1 436 aaPredicted RBP12.45□□□□□ -0.42
MRPS28-204ENST00000519120 SELENOIQ9C0D9 397 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
MRPS28-204ENST00000519120 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 PDCD6O75340 191 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 CRTAPO75718 401 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-204ENST00000519120 HBZP02008 142 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 UBBP0CG47 229 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 MYCNOSP40205 109 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 GPR12P47775 334 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 EGFEM1PQ0D2K5 195 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 MRPL41Q8IXM3 137 aaKnown RBP12.44□□□□□ -0.42
MRPS28-204ENST00000519120 BPIFB6Q8NFQ5 453 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 OR4K15Q8NH41 348 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
MRPS28-204ENST00000519120 CST11Q9H112 138 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 VCXQ9H320 206 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 BANF2Q9H503 90 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 PLSCR3Q9NRY6 295 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 ZNF580Q9UK33 172 aa12.44□□□□□ -0.42
MRPS28-204ENST00000519120 IGHV3-72A0A0B4J1Y9 119 aa12.43□□□□□ -0.42
MRPS28-204ENST00000519120 NCBP2LA6PVI3 153 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms