RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
PDGFRB-202ENST00000517488 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
PDGFRB-202ENST00000517488 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM14DPA8MWL7 114 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 SDCBPO00560 298 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 CHATP28329 748 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 ARHGDIBP52566 201 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 EMX1Q04741 257 aaPredicted RBP11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 HERPUD1Q15011 391 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 C5orf24Q7Z6I8 188 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 DTX3Q8N9I9 347 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 OR6M1Q8NGM8 313 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 CAPSLQ8WWF8 208 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 SULT4A1Q9BR01 284 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
PDGFRB-202ENST00000517488 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 SLC31A2O15432 143 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 DENRO43583 198 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 CA11O75493 328 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 ARL6IP5O75915 188 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 OR2F2O95006 317 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 BPNT1O95861 308 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 HBZP02008 142 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 MNDAP41218 407 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 GABARAPL2P60520 117 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 Q6ZTK2 550 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 PRR18Q8N4B5 295 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 MRPL30Q8TCC3 161 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 CFHR4Q92496 578 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 RBM14Q96PK6 669 aaKnown RBP11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 FAAP24Q9BTP7 215 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 LIN7BQ9HAP6 207 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 PLGRKTQ9HBL7 147 aa11.26□□□□□ -0.61
PDGFRB-202ENST00000517488 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 H3BUI4 141 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 SLC17A2O00624 439 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 SPINT2O43291 252 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 TSPAN15O95858 294 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 AMY1AP04745 511 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 AMY2AP04746 511 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 SNRNP70P08621 437 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 REG1BP48304 166 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 CLDN12P56749 244 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 RAB11BQ15907 218 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 C6orf201Q7Z4U5 140 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 OCSTAMPQ9BR26 566 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 WNT10AQ9GZT5 417 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 Q9H521 79 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 TAF9BQ9HBM6 251 aa11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
PDGFRB-202ENST00000517488 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 CCRL2O00421 344 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 HSD17B6O14756 317 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 FAM106CPP0CH98 169 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 CD28P10747 220 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 ARSBP15848 533 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 BLVRBP30043 206 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 VDAC2P45880 294 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 RAB7AP51149 207 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 ZNF134P52741 427 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 ABCA11PQ4W5N1 156 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 SPARTQ8N0X7 666 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 OR8H3Q8N146 312 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 ZNF439Q8NDP4 499 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 FAM110DQ8TAY7 271 aaPredicted RBP11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 AKR1E2Q96JD6 320 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 LPAR5Q9H1C0 372 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 MMP27Q9H306 513 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 NDUFB11Q9NX14 153 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 GNG12Q9UBI6 72 aa11.24□□□□□ -0.61
PDGFRB-202ENST00000517488 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 SOCS1O15524 211 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 MRPS14O60783 128 aaKnown RBP11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 OR10A3P58181 314 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 ZNF816Q0VGE8 651 aaPredicted RBP11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 PLA2G7Q13093 441 aa11.23□□□□□ -0.61
PDGFRB-202ENST00000517488 HNF4GQ14541 408 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms