RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 A0A1W2PP11 408 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 MEX3AA1L020 520 aaKnown RBP4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMEM14DPA8MWL7 114 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PTGES3LE9PB15 166 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SDCBPO00560 298 aaPredicted RBP4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SLC17A2O00624 439 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ITGB1BP1O14713 200 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 KCNAB3O43448 404 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 RGS11O94810 467 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 MT-ND4P03905 459 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GAPDHP04406 335 aaKnown RBP4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SRMP19623 302 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 NFYBP25208 207 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CHATP28329 748 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GDNFP39905 211 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 VHLP40337 213 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 LOXL3P58215 753 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 RPS27AP62979 156 aaKnown RBP4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 EBI3Q14213 229 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ARL6IP1Q15041 203 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PLA1AQ53H76 456 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 LIPKQ5VXJ0 399 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CD200R1LQ6Q8B3 271 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMEM219Q86XT9 240 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 COMMD1Q8N668 190 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 NRG4Q8WWG1 115 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ARL11Q969Q4 196 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 NEDD4LQ96PU5 975 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 OR5M11Q96RB7 305 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 MGLLQ99685 303 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CENPOQ9BU64 300 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMED9Q9BVK6 235 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GON7Q9BXV9 100 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SELENOIQ9C0D9 397 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 C12orf4Q9NQ89 552 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 LIN7CQ9NUP9 197 aaKnown RBP4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 NDUFB11Q9NX14 153 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 KCNIP1Q9NZI2 227 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GNG12Q9UBI6 72 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 HSF4Q9ULV5 492 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PEX16Q9Y5Y5 336 aa4.8□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TRBV6-6A0A0A6YYG2 114 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 IGHV1-3A0A0C4DH29 117 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 FAM172BPA6NC97 362 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 C12orf77C9JDV5 145 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ANKRD65E5RJM6 399 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PDCD5O14737 125 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 LANCL1O43813 399 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 RRP9O43818 475 aaKnown RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 YPEL1O60688 119 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMEM127O75204 238 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SCGNO76038 276 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 DUS4LO95620 317 aaKnown RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TSPAN15O95858 294 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 MPIG6BO95866 241 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 NAPSAO96009 420 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 HBZP02008 142 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SNRNP70P08621 437 aaKnown RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 VSIG8P0DPA2 414 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ARSBP15848 533 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMEM11P17152 192 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 MYL9P24844 172 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CD1BP29016 333 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GNG10P50151 68 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SCAND1P57086 179 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 KRTAP10-3P60369 221 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 EMX1Q04741 257 aaPredicted RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 P2RY14Q15391 338 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 HMGN3Q15651 99 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SYT6Q5T7P8 510 aaPredicted RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 SIGIRRQ6IA17 410 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 REC114Q7Z4M0 266 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TGIF2LXQ8IUE1 241 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 FOXRED2Q8IWF2 684 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 C5orf56Q8N8D9 126 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ZNF439Q8NDP4 499 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TMEM104Q8NE00 496 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 OR56B1Q8NGI3 324 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 OR56B4Q8NH76 319 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CHPT1Q8WUD6 406 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 RTN4IP1Q8WWV3 396 aaPredicted RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 EDARADDQ8WWZ3 215 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TAF15Q92804 592 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ST6GALNAC6Q969X2 333 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GALMQ96C23 342 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ORAI1Q96D31 301 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 YPEL2Q96QA6 119 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ABHD14AQ9BUJ0 271 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 GPR61Q9BZJ8 451 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 CCDC90BQ9GZT6 254 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PLGRKTQ9HBL7 147 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ING3Q9NXR8 418 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 PIPOXQ9P0Z9 390 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 ABRACLQ9P1F3 81 aa4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
SCARNA18.1-201ENST00000516330 TRAV1-2A0A0B4J238 106 aa4.78□□□□□ -1.64
SCARNA18.1-201ENST00000516330 A0A1W2PPK0 400 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms