RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 QRFPP83859 136 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 EMX1Q04741 257 aaPredicted RBP9.18□□□□□ -0.94
VCAN-212ENST00000515397 MLLT11Q13015 90 aaPredicted RBP9.18□□□□□ -0.94
VCAN-212ENST00000515397 PLA2G7Q13093 441 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 HES1Q14469 280 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 C9orf152Q5JTZ5 239 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 OR52L2PQ8NGH6 319 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 PHYHIPQ92561 330 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 THRSPQ92748 146 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 NEDD4LQ96PU5 975 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 RANBP3Q9H6Z4 567 aaPredicted RBP9.18□□□□□ -0.94
VCAN-212ENST00000515397 PLGRKTQ9HBL7 147 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 SPACA1Q9HBV2 294 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 ISYNA1Q9NPH2 558 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 ACOT13Q9NPJ3 140 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 GFOD1Q9NXC2 390 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 RAB26Q9ULW5 256 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 A0A1W2PPI3 338 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 SMIM30A4D0T7 59 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 ZNF736B4DX44 427 aaPredicted RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 CCRL2O00421 344 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 SLC22A1O15245 554 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 SOCS1O15524 211 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 KCNAB3O43448 404 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 ORC5O43913 435 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 AMY1AP04745 511 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 AMY2AP04746 511 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 VDAC2P45880 294 aaPredicted RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 RPS27AP62979 156 aaKnown RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 MADCAM1Q13477 382 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 GNMTQ14749 295 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 HES5Q5TA89 166 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 C10orf99Q6UWK7 81 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 MOB3BQ86TA1 216 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 Q8N2B8 174 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 OR51D1Q8NGF3 324 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 RBM14Q96PK6 669 aaKnown RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 OCSTAMPQ9BR26 566 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 HDHD3Q9BSH5 251 aaPredicted RBP9.17□□□□□ -0.94
VCAN-212ENST00000515397 TMEM59Q9BXS4 323 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 CST11Q9H112 138 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 TAF9BQ9HBM6 251 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 GNG12Q9UBI6 72 aa9.17□□□□□ -0.94
VCAN-212ENST00000515397 A0A1W2PRX2 142 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 SHISA3A0PJX4 238 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 TMEM14DPA8MWL7 114 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 SPINT2O43291 252 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 PEX14O75381 377 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 OR2F2O95006 317 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CSF1P09603 554 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CD37P11049 281 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CHATP28329 748 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 BLVRBP30043 206 aaPredicted RBP9.16□□□□□ -0.94
VCAN-212ENST00000515397 PPP1CCP36873 323 aaKnown RBP9.16□□□□□ -0.94
VCAN-212ENST00000515397 OR10A3P58181 314 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 RAB11BQ15907 218 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CT45A1Q5HYN5 189 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CCDC144NLQ6NUI1 221 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 OR10A7Q8NGE5 316 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CT45A3Q8NHU0 189 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 KCNG3Q8TAE7 436 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 SETD6Q8TBK2 473 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CFHR4Q92496 578 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 CREB3L1Q96BA8 519 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 LPAR5Q9H1C0 372 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 GHRLQ9UBU3 117 aa9.16□□□□□ -0.94
VCAN-212ENST00000515397 AMMECR1Q9Y4X0 333 aaPredicted RBP9.16□□□□□ -0.94
VCAN-212ENST00000515397 A0A0B4J203 849 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 IGHV1-3A0A0C4DH29 117 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A10PA6NDY2 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A18PA6NE21 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A16PA6NEW6 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A20PA6NIJ5 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A7PA6NKC0 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A12PA8MX19 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A5PA8MXJ8 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A23PA8MXZ1 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 H3BUI4 141 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 SLC17A2O00624 439 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 HSD17B6O14756 317 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FBXO24O75426 580 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 BPNT1O95861 308 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 IGKV1D-33P01593 117 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 IGKV1-33P01594 117 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 GAPDHP04406 335 aaKnown RBP9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A15PP0C7V4 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A13PP0C7W8 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A14PP0C7W9 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM90A24PP0C7X0 464 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 UBBP0CG47 229 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 FAM106CPP0CH98 169 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 ARSBP15848 533 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 TMEM11P17152 192 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 VEGFCP49767 419 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 ARHGDIBP52566 201 aa9.15□□□□□ -0.94
VCAN-212ENST00000515397 DEFA6Q01524 100 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms