RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 MZT1Q08AG7 82 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 LY6DQ14210 128 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 PHLDA2Q53GA4 152 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 TSPO2Q5TGU0 170 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 TRAT1Q6PIZ9 186 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 RTN4RL2Q86UN3 420 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 MCEMP1Q8IX19 187 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 WDR31Q8NA23 367 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 OR56B2PQ8NGI1 322 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 OR52M1Q8NGK5 317 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 SCGB1C1Q8TD33 95 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 SECTM1Q8WVN6 248 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 C14orf79Q96F83 325 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 POM121L2Q96KW2 1035 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 ALKBH3Q96Q83 286 aaPredicted RBP6.92□□□□□ -1.3
DDR1-273ENST00000513514 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 NIPSNAP3BQ9BS92 247 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 RTL8AQ9BWD3 113 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 AKIRIN1Q9H9L7 192 aaPredicted RBP6.92□□□□□ -1.3
DDR1-273ENST00000513514 RNF115Q9Y4L5 304 aa6.92□□□□□ -1.3
DDR1-273ENST00000513514 ARID1BQ8NFD5 2236 aaPredicted RBP6.92□□□□□ -1.3
DDR1-273ENST00000513514 TNRC6AQ8NDV7 1962 aaKnown RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 KIAA1549Q9HCM3 1950 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 RELNP78509 3460 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 NKX2-6A6NCS4 301 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CD300LBA8K4G0 201 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 M0R036 132 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 AP4M1O00189 453 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 KCNAB3O43448 404 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 PGLYRP1O75594 196 aaPredicted RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 CCL4P13236 92 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 ZNF44P15621 663 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 S100PP25815 95 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 ATP6V0CP27449 155 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 NTF4P34130 210 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CLDN18P56856 261 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 SOX8P57073 446 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 FOXL2P58012 376 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 PAX5Q02548 391 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 NHLH2Q02577 135 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CLN3Q13286 438 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 IGFBP7Q16270 282 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 SSX2Q16385 188 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 SP6Q3SY56 376 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 WIPI1Q5MNZ9 446 aaPredicted RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 RBMS3Q6XE24 437 aaKnown RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 CENPVQ7Z7K6 275 aaPredicted RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 CALHM1Q8IU99 346 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 FAM58AQ8N1B3 248 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 BOLLQ8N9W6 283 aaKnown RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 CPEB3Q8NE35 698 aaKnown RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 OR10V1Q8NGI7 309 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CT55Q8WUE5 264 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 TVP23CQ96ET8 276 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 SIGLEC12Q96PQ1 595 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CIB3Q96Q77 187 aaPredicted RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 WFDC1Q9HC57 220 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 CISD1Q9NZ45 108 aaKnown RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 LOXL2Q9Y4K0 774 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 WIPI2Q9Y4P8 454 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
DDR1-273ENST00000513514 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
DDR1-273ENST00000513514 COL6A6A6NMZ7 2263 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 ANKRD17O75179 2603 aaKnown RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 UTP20O75691 2785 aaKnown RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 C5orf49A4QMS7 147 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 FAM90A9PA6NNJ1 464 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 TXNL1O43396 289 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 NEURL1O76050 574 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 IGHV2-5P01817 119 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 CELA2AP08217 269 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 JMJD7P0C870 316 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 RAC2P15153 192 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 ZNF14P17017 642 aaPredicted RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 BCL3P20749 454 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 ANOS1P23352 680 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 CD82P27701 267 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 OTX2P32243 289 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 AKR1D1P51857 326 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 HABP2Q14520 560 aaPredicted RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 ZNF146Q15072 292 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 TBC1D28Q2M2D7 210 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 TMEM249Q2WGJ8 235 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 ZNF468Q5VIY5 522 aaPredicted RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 ZNF324BQ6AW86 544 aaPredicted RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 MEX3BQ6ZN04 569 aaKnown RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 ZNF818PQ6ZRF7 136 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 OR5C1Q8NGR4 320 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 FAM213BQ8TBF2 198 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 MRPL30Q8TCC3 161 aaKnown RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 RELTQ969Z4 430 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 CLCC1Q96S66 551 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 USB1Q9BQ65 265 aaKnown RBP6.9□□□□□ -1.3
DDR1-273ENST00000513514 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 PRRG4Q9BZD6 226 aa6.9□□□□□ -1.3
DDR1-273ENST00000513514 SMIM3Q9BZL3 60 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms