RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 AK6Q9Y3D8 172 aaKnown RBP10.61□□□□□ -0.71
RNF4-215ENST00000511843 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 IGHV3-72A0A0B4J1Y9 119 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A10PA6NDY2 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A18PA6NE21 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A16PA6NEW6 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A20PA6NIJ5 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A7PA6NKC0 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A12PA8MX19 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A5PA8MXJ8 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A23PA8MXZ1 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 HSD17B6O14756 317 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 KCNAB3O43448 404 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 WIPF1O43516 503 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 ORC5O43913 435 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 PDCD6O75340 191 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FBXO24O75426 580 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 HBZP02008 142 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 AMY1AP04745 511 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 AMY2AP04746 511 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 LPLP06858 475 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A15PP0C7V4 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A13PP0C7W8 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A14PP0C7W9 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAM90A24PP0C7X0 464 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 HTR2CP28335 458 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 VDAC2P45880 294 aaPredicted RBP10.6□□□□□ -0.71
RNF4-215ENST00000511843 RPS27AP62979 156 aaKnown RBP10.6□□□□□ -0.71
RNF4-215ENST00000511843 HNF4GQ14541 408 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 GNMTQ14749 295 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 SSX1Q16384 188 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 C2orf68Q2NKX9 166 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 NSUN5P1Q3KNT7 163 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 C6orf201Q7Z4U5 140 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 FAAP24Q9BTP7 215 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 TMEM59Q9BXS4 323 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 CST11Q9H112 138 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 LIN7BQ9HAP6 207 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 ISYNA1Q9NPH2 558 aa10.6□□□□□ -0.71
RNF4-215ENST00000511843 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 OOSP1A8MZH6 123 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 SLC22A1O15245 554 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 PEX14O75381 377 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 OR2F2O95006 317 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 CALRP27797 417 aaKnown RBP10.59□□□□□ -0.71
RNF4-215ENST00000511843 CHATP28329 748 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 CLDN12P56749 244 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 QRFPP83859 136 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 HES1Q14469 280 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 TBCEQ15813 527 aaPredicted RBP10.59□□□□□ -0.71
RNF4-215ENST00000511843 C9orf152Q5JTZ5 239 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 GAPTQ8N292 157 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 MRPL30Q8TCC3 161 aaKnown RBP10.59□□□□□ -0.71
RNF4-215ENST00000511843 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
RNF4-215ENST00000511843 OCSTAMPQ9BR26 566 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 WNT10AQ9GZT5 417 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 GNG12Q9UBI6 72 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 GHRLQ9UBU3 117 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 RAB26Q9ULW5 256 aa10.59□□□□□ -0.71
RNF4-215ENST00000511843 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 CCRL2O00421 344 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 SPINT2O43291 252 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 UBBP0CG47 229 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 CD37P11049 281 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 TMEM11P17152 192 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 ZNF134P52741 427 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 DEFA6Q01524 100 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 Q6ZPA2 131 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 SLC16A12Q6ZSM3 486 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 ZNF367Q7RTV3 350 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 C16orf82Q7Z2V1 217 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 MOB3BQ86TA1 216 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 C1QL4Q86Z23 238 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 ZNF439Q8NDP4 499 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 OR52M1Q8NGK5 317 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 OR6M1Q8NGM8 313 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 KCNG3Q8TAE7 436 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 NEDD4LQ96PU5 975 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 CITED2Q99967 270 aaPredicted RBP10.58□□□□□ -0.72
RNF4-215ENST00000511843 ACOT13Q9NPJ3 140 aa10.58□□□□□ -0.72
RNF4-215ENST00000511843 IGHV1-3A0A0C4DH29 117 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 SHISA3A0PJX4 238 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 H3BUI4 141 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 SLC17A2O00624 439 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 SOCS1O15524 211 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 BPNT1O95861 308 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 FAM106CPP0CH98 169 aa10.57□□□□□ -0.72
RNF4-215ENST00000511843 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms