RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 OR52N1Q8NH53 320 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 OR1L1Q8NH94 360 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 TSEN15Q8WW01 171 aaKnown RBP12.37□□□□□ -0.43
RAB40C-202ENST00000509637 KCTD7Q96MP8 289 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 FAM192AQ9GZU8 254 aa12.37□□□□□ -0.43
RAB40C-202ENST00000509637 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
RAB40C-202ENST00000509637 MOSP00540 346 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF137PP52743 207 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 ADARB1P78563 741 aaKnown RBP12.36□□□□□ -0.43
RAB40C-202ENST00000509637 DOC2BQ14184 412 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
RAB40C-202ENST00000509637 SLC25A48Q6ZT89 311 aaKnown RBP12.36□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF491Q8N8L2 437 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 C4orf3Q8WVX3 66 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 GPER1Q99527 375 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 MRPS18AQ9NVS2 196 aaKnown RBP12.36□□□□□ -0.43
RAB40C-202ENST00000509637 IL36GQ9NZH8 169 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 WSB1Q9Y6I7 421 aa12.36□□□□□ -0.43
RAB40C-202ENST00000509637 TMEM30CPA0ZSE6 113 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ORC5O43913 435 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 IGF1P05019 195 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
RAB40C-202ENST00000509637 IGFBP3P17936 291 aaPredicted RBP12.35□□□□□ -0.43
RAB40C-202ENST00000509637 SERPINA2P20848 420 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ETV1P50549 477 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 CASC10Q5T4H9 136 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 OR2G6Q5TZ20 316 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 CBR4Q8N4T8 237 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 OR4K15Q8NH41 348 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 OR5B12Q96R08 314 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ALX4Q9H161 411 aaPredicted RBP12.35□□□□□ -0.43
RAB40C-202ENST00000509637 FAM118AQ9NWS6 357 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF107Q9UII5 783 aaPredicted RBP12.35□□□□□ -0.43
RAB40C-202ENST00000509637 ZNF256Q9Y2P7 627 aaPredicted RBP12.35□□□□□ -0.43
RAB40C-202ENST00000509637 FBXO7Q9Y3I1 522 aa12.35□□□□□ -0.43
RAB40C-202ENST00000509637 TRAV8-7A0A075B6U6 113 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 C3orf84H3BNL1 204 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 RPSAP08865 295 aaKnown RBP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 RCC1P18754 421 aaPredicted RBP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 CHATP28329 748 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 ALDH3A2P51648 485 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 GNMTQ14749 295 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 KLHL22Q53GT1 634 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 SIGIRRQ6IA17 410 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 OVCH2Q7RTZ1 564 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 GAPTQ8N292 157 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 DCUN1D4Q92564 292 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 METTL9Q9H1A3 318 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 TPSG1Q9NRR2 321 aa12.34□□□□□ -0.43
RAB40C-202ENST00000509637 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
RAB40C-202ENST00000509637 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 SOX15O60248 233 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 WBP4O75554 376 aaKnown RBP12.33□□□□□ -0.44
RAB40C-202ENST00000509637 IGLV1-40P01703 118 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 HBZP02008 142 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 MYF6P23409 242 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 SOX6P35712 828 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 GBX2P52951 348 aaPredicted RBP12.33□□□□□ -0.44
RAB40C-202ENST00000509637 NDPQ00604 133 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 LSAMPQ13449 338 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 SLC22A6Q4U2R8 563 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
RAB40C-202ENST00000509637 DDI2Q5TDH0 399 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 LYPD6Q86Y78 171 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF580Q9UK33 172 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 GMPPBQ9Y5P6 360 aa12.33□□□□□ -0.44
RAB40C-202ENST00000509637 EPPK1P58107 5090 aaKnown RBP12.32□□□□□ -0.44
RAB40C-202ENST00000509637 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 TRBV5-5A0A0J9YX44 114 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 ATP6V0E1O15342 81 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 OGG1O15527 345 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF93P35789 620 aaPredicted RBP12.32□□□□□ -0.44
RAB40C-202ENST00000509637 OR52L2PQ8NGH6 319 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 GPR148Q8TDV2 347 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
RAB40C-202ENST00000509637 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
RAB40C-202ENST00000509637 TMEM138Q9NPI0 162 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 CLEC2DQ9UHP7 191 aa12.32□□□□□ -0.44
RAB40C-202ENST00000509637 AIPO00170 330 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 FADS2O95864 444 aaKnown RBP12.31□□□□□ -0.44
RAB40C-202ENST00000509637 BDKRB2P30411 391 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 RUNX1Q01196 453 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 RAB40BQ12829 278 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 MPV17LQ2QL34 196 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 Q3ZCU0 254 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 MORN2Q502X0 79 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms