RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 SERPINB7O75635 380 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 TYMSP04818 313 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 BCHEP06276 602 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 RBP1P09455 135 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 TSPAN19P0C672 248 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 CSRP1P21291 193 aaKnown RBP1.65□□□□□ -2.15
PDE4D-218ENST00000509368 STC1P52823 247 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 FGF8P55075 233 aaPredicted RBP1.65□□□□□ -2.15
PDE4D-218ENST00000509368 SYNJ2BPP57105 145 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 RBX1P62877 108 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 BNIP2Q12982 314 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 HTR4Q13639 388 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 APOFQ13790 326 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 EDDM3AQ14507 147 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 TAF1AQ15573 450 aaPredicted RBP1.65□□□□□ -2.15
PDE4D-218ENST00000509368 RFX4Q33E94 735 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ARHGAP11BQ3KRB8 267 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ATAD3CQ5T2N8 411 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 NIPAL1Q6NVV3 410 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ZNF343Q6P1L6 599 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 MRPL55Q7Z7F7 128 aaKnown RBP1.65□□□□□ -2.15
PDE4D-218ENST00000509368 RAB43Q86YS6 212 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 MDS2Q8NDY4 140 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 OR51G1Q8NGK1 321 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 OR1S1Q8NH92 325 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 PPP3R2Q96LZ3 170 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 COL21A1Q96P44 957 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 VAT1Q99536 393 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 GABARAPL3Q9BY60 117 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ZNF442Q9H7R0 627 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 KCNJ16Q9NPI9 418 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ACOT13Q9NPJ3 140 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 CCL28Q9NRJ3 127 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 MED29Q9NX70 200 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 ST3GAL6Q9Y274 331 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 PLXNA4Q9HCM2 1894 aa1.65□□□□□ -2.15
PDE4D-218ENST00000509368 HELZP42694 1942 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 H0Y980 276 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TNFRSF11BO00300 401 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TXNDC9O14530 226 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CRLF1O75462 422 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 RCBTB2O95199 551 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 GADD45GO95257 159 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 HAND1O96004 215 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CTSLP07711 333 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 MMP7P09237 267 aaPredicted RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 PGA4P0DJD7 388 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 PGA3P0DJD8 388 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CD52P31358 61 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 RCVRNP35243 200 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 COILP38432 576 aaPredicted RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CEACAM3P40198 252 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 HCAR3P49019 387 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 P2RX1P51575 399 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 SLC35A1P78382 337 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 SLC7A9P82251 487 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 PMVKQ15126 192 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CLEC12BQ2HXU8 276 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TMEM97Q5BJF2 176 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 ZNF493Q6ZR52 646 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 STRADAQ7RTN6 431 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 THOC6Q86W42 341 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 LRRC25Q8N386 305 aaPredicted RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 OR13D1Q8NGV5 346 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 NT5CQ8TCD5 201 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 ACTRT1Q8TDG2 376 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TCEAL3Q969E4 200 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 EXOSC8Q96B26 276 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 HAUS1Q96CS2 278 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 YIPF6Q96EC8 236 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 MRPL48Q96GC5 212 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 PYURFQ96I23 114 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 VSIG2Q96IQ7 327 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 SLC25A37Q9NYZ2 338 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 NUFIP1Q9UHK0 495 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 FBXO5Q9UKT4 447 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 HHLA2Q9UM44 414 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 ANGPT4Q9Y264 503 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 NFASCO94856 1347 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 MAP1BP46821 2468 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 BAZ2AQ9UIF9 1905 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 SPEGQ15772 3267 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 SETXQ7Z333 2677 aaKnown RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 DOCK5Q9H7D0 1870 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 IGLV1-36A0A0B4J1U3 117 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TVP23AA6NH52 213 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 DISC1C4P0D8 188 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 H0Y9J4 135 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CCRL2O00421 344 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 MYL12BO14950 172 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 ZZEF1O43149 2961 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 TGOLN2O43493 480 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 CCNE2O96020 404 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 P01737 135 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 MT-ND4P03905 459 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 RLN2P04090 185 aa1.64□□□□□ -2.15
PDE4D-218ENST00000509368 HIST1H1TP22492 207 aaPredicted RBP1.64□□□□□ -2.15
PDE4D-218ENST00000509368 PSMB9P28065 219 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms